Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0657 ATGGCTGGGTTCTTCTCTCTAGGCCCACACAACAAACAGGAAGAAGAAAGGGAAGACAACAACAACAGTAACAGCCTATTCTTGTTCAGGAACGAGGAGATCTACAACAAGGGATTTGAGATATGGCCGCAGTCACAGTCTTATCATCAGCCGCATCAAAGCTTGACCAACTTTTACTCGTTTGGGGCGGGTCCTAGTCGCAGAAATTCCTCCCACGACGACGTCGTCTCCGAGGATTCGACGAGGTTCGGATTCACGGTCATGAGGTCTGGAGGTCTAGGAGGCGGCATGAATTGTCAGGACTGTGGGAACCAAGCGAAGAAAGACTGTCCACATCTCAGATGCAGAACTTGTTGTAAGAGCCGAGGGTTTCAGTGCCAAACCCACGTCAAGAGCACTTGGGTTCCCGCCGCCAAACGCCGTGAACGACAGCAACAACTCGCCTCGTTGCAGCAACAGCAGGAACAACAGTTTAGGGGAGAGAATTCAAAACGACACAGAGAAATTCAAGCTTCCGGCTCTCTTGCCTGCGCTCCTTTAATGCCACTCGCAACAACAGGGTTGGAAGTGGGACAATTTCCACCAGAGGTGAACTCTTCGGCTGTGTTTCGGTGCGTGAAAGTAAGCGCAATGGACAGCCCAGATGAACAGTACGCGTATCAAACAGCTGTGAATATCGGAGGGCACCTGTTCAAGGGAATTCTGTATGACAAAGGCCCTGAAGGTGCTTACACCACAGGTGGCGAGAGCTCCTCCGGTGGAGCCGAAGCCCAACAACAACTCAATCTCTTAACCGCCGCAACGGCCACCGCAACCACCACCAGCGCCATCCCATTTGACCCTTCGTCCCTCTTCCCGGCGCCGCTCAATGCCTTCATGGCTGGTACGCAATTCTTCCCACCCCCAAGGTCCTAA 915 0.529 MAGFFSLGPHNKQEEEREDNNNSNSLFLFRNEEIYNKGFEIWPQSQSYHQPHQSLTNFYSFGAGPSRRNSSHDDVVSEDSTRFGFTVMRSGGLGGGMNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLASLQQQQEQQFRGENSKRHREIQASGSLACAPLMPLATTGLEVGQFPPEVNSSAVFRCVKVSAMDSPDEQYAYQTAVNIGGHLFKGILYDKGPEGAYTTGGESSSGGAEAQQQLNLLTAATATATTTSAIPFDPSSLFPAPLNAFMAGTQFFPPPRS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0657 304 NCBIfam LRP1 C-terminal domain 192 240 IPR006511 -
Bisa05g0657 304 Pfam Domain of unknown function (DUF702) 96 241 - -
Bisa05g0657 304 MobiDBLite consensus disorder prediction 1 23 - -
Bisa05g0657 304 NCBIfam putative zinc finger domain, LRP1 type 98 140 IPR006510 -
Bisa05g0657 304 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 290 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0657 Bisa-ChrBisa05 10784788 10786173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0657 1 304 C2H2 Transcription Factor Family AT1G75520 48.767 1.99e-91 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bisa05g0657 DUF702 6.9e-65 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0657 05 10784788 10786173 Bisa09g2014 09 32154810 32156049 CCT