Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0654 ATGAAGATCCAGTGCGACGTCTGCAACAAGCACGAGGCTTCTCTCTTCTGCACTGCCGATGAGGCCGCCCTCTGCGACGCCTGCGACCACCGTGTCCACCATGCCAACAAGCTGGCCTCCAAGCACCAACGCTTCTCTCTTCATCGCCCTTCTCCCAAGCAATTCCCTCTTTGCGATATTTGCCTGTCGCAGAACTTAGTGAAGAGCTCTGTTTCTGCTTCTTCCGCCACCTCACATCCCACTTTAATGGCCAATACTTCATCTTCAACTGTAGCAACCACAGTAAACGAAGGGGCTGCAGCTTTCACAAGCAGCATCTCTGAGTATTTGATAGAGACTCTCCCTGGCTGGCAGGTCGACGACTTTCTCGATGCTTCTGCTCTTCCTTTTGGTTTCAGTAAGAGTGACGATACGTTGGGTTTGGTTAATGCTGATATTGAGGGCAAGATGGGAACTTTATCGCCTGAGAGTATAGGGATCTGGGTTCCTCAAGCACCTCCTCCTCTGTATACAACACAAATGGATCGGCAGATTAAGTTCCAAGAGACAAAAGAAGCGACCAACATTGAAGGCAGCAGATCAGGGTCGAGGGATGATAATTTCATAGTTCCACAGATTAGCCCTCCCTCTAGTGTGTCCAAGAGATCCAGACTTCTGTGGGTCTCGCCTCACTTTTCAGACTTTTCACGCCCCAAAACTATGAAGGAACAAGAGGGCAATCCACAGTTTGTTTACTGTTTTAGACTTTATAGTCAGAAGAGAATTCTGGTTCTGGTTCTGGAAATTCACTGAAACAAAAAGAGTATGGAAATTTCTGGTTTAAGCCAATTCACGTTGGGTCCTGAAGAGAGTATGCATGCAACACGTAAGGCCCTCACATATGAAGTTGAGGATGATGCCTCAGGCGCGTCAAGTTTACGTACATTCAGAGTGTTTGAGTGTATTCAGAAAGTTGGTCATTTTTCACAAAGGGCAGAGACTTTATCTGAATTAGAAGTCATGGTTCAGCCTAACCTTGACGTCCTTAATTCAAGCTGA 1038 0.4682 MKIQCDVCNKHEASLFCTADEAALCDACDHRVHHANKLASKHQRFSLHRPSPKQFPLCDICLSQNLVKSSVSASSATSHPTLMANTSSSTVATTVNEGAAAFTSSISEYLIETLPGWQVDDFLDASALPFGFSKSDDTLGLVNADIEGKMGTLSPESIGIWVPQAPPPLYTTQMDRQIKFQETKEATNIEGSRSGSRDDNFIVPQISPPSSVSKRSRLLWVSPHFSDFSRPKTMKEQEGNPQFVYCFRLYSQKRILVLVLEIHXNKKSMEISGLSQFTLGPEESMHATRKALTYEVEDDASGASSLRTFRVFECIQKVGHFSQRAETLSELEVMVQPNLDVLNSS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0654 345 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Bisa05g0654 345 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bisa05g0654 345 CDD Bbox1_BBX-like 5 47 - -
Bisa05g0654 345 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bisa05g0654 345 PANTHER B-BOX ZINC FINGER PROTEIN 22 72 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0654 Bisa-ChrBisa05 10719705 10722333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0654 1 61 C2C2-CO-like Transcription Factor Family AT1G75540 73.016 2.37e-24 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa05g0654 zf-B_box 1.5e-05 No_clan