Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0640 ATGGATGACGCTGGGCATCGTGAAAATGGGAGGCACAAAGCAGATCAGTATAAATCAGCCCAAGGACAGTGGTTGATGCAACATCAGCCTTCCATGAAGCAGATTATGACAATTATGGCAGAAAGAGATGCAGCCATTCAAGAACGAAATCTAGCCCTTTCTGAGAAGAAGGCAGCCCTGGCTGAGCGTGACTTGGCATTCATGCAGCGAGATACTGCAATTGCAGAACGAAATAATGCAATAATCGAACGAGATAATGCAATTGCAACTTTTCAGTATCGAGAAAACCCCTTAGCTGCTGGAACGTCTGCATGTCCTCCAGGATGCCAGATCTCCCGTGGAGTCAAGCACATGCATCATCCTCAGCAACAGGTACACCAATTGCCTCATATGGGTGATGCTTCTTACAGCACACGGGAAATCCACGCAAGTGATGCTCTTCCTGAAGCGTCAATTCCTTCTGAGCCTGGGAAACAACGGCGGGCCAAGCGACCAAAGGAGGAGGGTAAGTCAGTTTCACCTAATAAAAAGAATACAAAATCTGCAAGAAAGGTCAAGAGGGACAATGAAGACTTGAATAAAATGATGTTTGGCAAGGCACATGAATGGAAGAGTGGTCAGGAAATGGCTAATGGAGGTGATGATGTTAAGAAACAGTTAGTGGTATCAAAGGCTGATTGGAAAGGTCAGGACTTGGGGCTGAACCAAGTAGTATATGACGAGTCAACTATGCCACCCCCAGTATGCTCTTGTACTGGTGACCTGAGACAGTGCTACAAATGGGGGAACGGGGGCTGGCAGTCTGCTTGTTGCACGACCACCCTATCAATGTACCCACTTCCAGCAGTGCCCAACAAGAGGCATGCCCGGGTAGGTGGCCGGAAGATGAGTGGAAGTGCTTTTAATAAGCTTCTTAGTAGGCTTGCAGCAGAAGGGCATGATCTGTCAAACCCCATTGACCTCAAGGATCATTGGGCCAAACATGGCACTAATCGCTATATAACAATCAAGTAG 1014 0.4744 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMTIMAERDAAIQERNLALSEKKAALAERDLAFMQRDTAIAERNNAIIERDNAIATFQYRENPLAAGTSACPPGCQISRGVKHMHHPQQQVHQLPHMGDASYSTREIHASDALPEASIPSEPGKQRRAKRPKEEGKSVSPNKKNTKSARKVKRDNEDLNKMMFGKAHEWKSGQEMANGGDDVKKQLVVSKADWKGQDLGLNQVVYDESTMPPPVCSCTGDLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPIDLKDHWAKHGTNRYITIK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0640 337 MobiDBLite consensus disorder prediction 144 190 - -
Bisa05g0640 337 MobiDBLite consensus disorder prediction 1 21 - -
Bisa05g0640 337 MobiDBLite consensus disorder prediction 1 15 - -
Bisa05g0640 337 SMART GAGA_bind_2 1 337 IPR010409 -
Bisa05g0640 337 PANTHER - 1 337 IPR010409 -
Bisa05g0640 337 Coils Coil 51 71 - -
Bisa05g0640 337 MobiDBLite consensus disorder prediction 156 174 - -
Bisa05g0640 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0640 Bisa-ChrBisa05 10486256 10487394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0640 65 337 BBR or BPC Transcription factor family AT5G42520 64.138 3.76e-119 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bisa05g0640 GAGA_bind 1.4e-106 No_clan