Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0633 ATGGCTTTCGTCGAAGAAAAGATTAAAACCGGAGGACTAGTTGTTGGGGCTGCTCAATCTCTAGTTGCCGAAATGAAGATGCTTAAAGAACTGCAGGATCAATCTGGGGCTCGGAAGACTATAAATTCCGAGCTATGGCATGCTTGCGCTGGCCCACTTGTAAGCTTGCCTCAGGTGGGGGGTCTCGTGTATTACTTCCCTCAGGGACATAGCGAGCAGGTGGCAGCTTCCACTAGAAGAACAGCAACCTCGCAGATTCCGAACTATCCAAATCTTCCATCCCAGTTACTTTGCCAAGTTCAAAATGTCACACTTCACGCAGACAAAGAAACAGACGAAATCTATGCTCAAATGAGTCTCCAACCATTGAATTCTGAAAAAGATGTGTTTCCCGTATCTGAGTTTGGGTTGAAGGCCAGTAAACATCCGAGTGAATTTTTCTGCAAAACTTTGACAGCTAGTGACACGAGCACGCACGGTGGCTTCTCAGTACCTCGCAGGGCTGCAGAAAAGCTCTTTCCTCCCCTGGATTACACGATTCAACCCCCAACTCAAGAACTGGTTGTCCGAGACTTACATGATAATACCTGGACTTTCCGGCATATATACCGAGGTCAGCCGAAGAGACATCTTCTCACGACAGGTTGGAGTTTGTTTGTAGGCTCAAAAAGACTTAAAGCAGGTGACTCAGTTCTTTTTATCAGGGACGAGAAATCGCAATTGCTAGTAGGTGTTAGGCGTGCTAACCGTCAACAGACAACATTGCCATCATCTGTCCTGTCTGCAGATAGCATGCATATAGGTGTGCTTGCTGCTGCAGCTCATGCTGCTGCTAATCATAGCCCATTCACTATTTTCTACAACCCAAGGGCGTGCCCTTCAGAATTTGTTATTCCATTGGCTAAATACAGAAAAGCTGTATATGGCACCCAACTCTCAGTGGGTATGAGATTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGATATATGGGCACAATAGTTGGTATCAGTGACTTGGATCCTTTGAGGTGGCCTGGTTCTAAGTGGCGAAATATTCAGGTCGAGTGGGATGAGCCTGGATGCGGCGATAAGCAGAGTAGAGTTAGTTCATGGGAAATTGAGACTCCTGAAAGTCTTTTTATCTTTCCTTCTTTGACTTCAAGTCTGAAACGACCATTGCAATCTGGATCTTTGGGTACAGAGAATGAGTGGGGGACTTTGTTAAGAAGGCCTTTTATACAAGTTCCTGAAAATGGAAATGTGGAGCTCTCAAATTCTATATCTAATCTATACTTGGAACACCTGATGAAAATTCTTTTTAAACCTCAACTTGTCAACAATCCTGGAGCTTTTTCATCAGTCATGCAGCAAGAATCTGTGGCCAAGTGTGATCCCTTGCAGGATGTGAAGACCGCTCTGGCAACAGATAACCAAAAAGCTCGTCTGGCATGTTCAGGGAGCATGCCACCAAAAAGTCTAGATCATTCTCAATCTTTTCTTGATCAGTCTAATGCCTTAAACTTGCATTCCCTAGTGAAAAGTGATCAAACTGGAAAACTGCAGCATCCTCTTCCCAAAATTGATAACCCTCAATCTTCTGGAGCAGTTATTGATAAGACAAAATTAGAATCTGTGGATTTAACAGATCATGTTATTGACTTCCCTTCCATGGAAGGCTGCAATACAGAAAAAATGGCTGCCAACTCTGTAAACCCAATGGGTGCGAACCAGTTGACATATCTTAATCAAAACCAGAGTCCATGGCCCATGCAGCCTCAGTTAGAATCATCAATATCTCACTCTCCACTAGCTGATGTTCCTCAATCTGATTATGCTATTTTAAATGGTATACTTCCTCACCCAGATGTTGATGAATGGATGTTGTATTCTTCTTGCCAACCTTTTGCTGGGACAAGCAGATCAACTGGGCCAATGTCGGCTTTGCAAGAACAGTCTGCACTTCTTCCTCAAGCAGTTAATGCCCCCTTATCCTCCATGAGCCAAGAAATGTGGGATAATTATCTCAAAAATTTAAAGTTGTTACCTCAAGTAGACCAGCTATCACCCATCTCTCAGCAAGGCCTACACAGCTTGAATTGTATACCTAGTTCAAACAATTTGAGGGATCTATCAACTGAGAGCAACAATCAAAGTGGGGTATACAATAGTGTCAATGTTGATATTAGTAACAGTGCAAGTACTATGGTTGATCCTTCTACTTCAAGTACCATTATGGATGAGTTTTGCACTTTGAAGGATGGGGATTATCAGAACCCATCAGATTGCATGGTAGGCAACATAAGTTCAAGCCAGGATATCCAGTCTCAGATAACCTCAGCAAGTCTAGCGGAGTCGCATGTTTTTCCTCTGCAAGACATCCCTGACAACTCAGGTGGTACGTCTTCAAGCCATGTTGATTTTGATGAAAGCAGCTTTCTGCAGAACAACTCATGGCAGCAAGTTTCTGCGCCCATGCGAACCTACACCAAGGTTCAAAAGGCAGGATCGGTAGGAAGATCAATTGATGTAACTACTTTTAGGAACTACGAGGAACTGATTTCTGCAATTGAATGCATGTTTGGACTGGAGGGTCTGCTGAATGACACTAGAGGTTCAGGATGGAAATTGGTATATGTAGATTATGAAAACGATGTCCTACTTGTTGGGGATGATCCTTGGGAGGAATTCGTGGGGTGTGTCCGCTGCATCAGAATTTTATCTCCCGTGGAAGTTCAACAGATGAGCGAGGAGGGAATGAAGCTTCTGAACAGTGCTGCGGCTCAAGAGACCAATGGTTCCATGTCCGGTGGCTGCACTTAA 2829 0.4401 MAFVEEKIKTGGLVVGAAQSLVAEMKMLKELQDQSGARKTINSELWHACAGPLVSLPQVGGLVYYFPQGHSEQVAASTRRTATSQIPNYPNLPSQLLCQVQNVTLHADKETDEIYAQMSLQPLNSEKDVFPVSEFGLKASKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANHSPFTIFYNPRACPSEFVIPLAKYRKAVYGTQLSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNIQVEWDEPGCGDKQSRVSSWEIETPESLFIFPSLTSSLKRPLQSGSLGTENEWGTLLRRPFIQVPENGNVELSNSISNLYLEHLMKILFKPQLVNNPGAFSSVMQQESVAKCDPLQDVKTALATDNQKARLACSGSMPPKSLDHSQSFLDQSNALNLHSLVKSDQTGKLQHPLPKIDNPQSSGAVIDKTKLESVDLTDHVIDFPSMEGCNTEKMAANSVNPMGANQLTYLNQNQSPWPMQPQLESSISHSPLADVPQSDYAILNGILPHPDVDEWMLYSSCQPFAGTSRSTGPMSALQEQSALLPQAVNAPLSSMSQEMWDNYLKNLKLLPQVDQLSPISQQGLHSLNCIPSSNNLRDLSTESNNQSGVYNSVNVDISNSASTMVDPSTSSTIMDEFCTLKDGDYQNPSDCMVGNISSSQDIQSQITSASLAESHVFPLQDIPDNSGGTSSSHVDFDESSFLQNNSWQQVSAPMRTYTKVQKAGSVGRSIDVTTFRNYEELISAIECMFGLEGLLNDTRGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPVEVQQMSEEGMKLLNSAAAQETNGSMSGGCT 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0633 942 Pfam B3 DNA binding domain 147 248 IPR003340 GO:0003677
Bisa05g0633 942 SUPERFAMILY DNA-binding pseudobarrel domain 137 276 IPR015300 -
Bisa05g0633 942 Gene3D - 145 248 IPR015300 -
Bisa05g0633 942 ProSiteProfiles PB1 domain profile. 829 913 IPR000270 GO:0005515
Bisa05g0633 942 FunFam Auxin response factor 145 249 - -
Bisa05g0633 942 FunFam Auxin response factor 824 918 - -
Bisa05g0633 942 SMART B3_2 147 249 IPR003340 GO:0003677
Bisa05g0633 942 FunFam Auxin response factor 311 383 - -
Bisa05g0633 942 Gene3D - 825 918 - -
Bisa05g0633 942 SUPERFAMILY CAD & PB1 domains 829 908 - -
Bisa05g0633 942 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 38 919 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa05g0633 942 Pfam AUX/IAA family 825 914 IPR033389 -
Bisa05g0633 942 CDD B3_DNA 146 247 IPR003340 GO:0003677
Bisa05g0633 942 ProSiteProfiles B3 DNA-binding domain profile. 147 249 IPR003340 GO:0003677
Bisa05g0633 942 Pfam Auxin response factor 273 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa05g0633 942 Gene3D - 311 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0633 Bisa-ChrBisa05 10422665 10427827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0633 20 938 B3 DNA Binding Superfamily AT1G19850 59.451 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa05g0633 AUX_IAA 3.7e-10 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0633 05 10422665 10427827 Bisa05g0633 05 10422665 10427827 ECH