Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0624 ATGGCTCTCCTAACTTTCTTGCCCGAGCAGTCAGGCTCGGACCCCAAATCACAACTTCCCAAACGCAAGCGAAAGCAGCATCACAAACAGAAACAGAAGCAGAAGCAGAAGCAGAAACCAGCATCTTCATGGGACCAAATCAAGAATCTGCTCACCTGCAAGCAGATCCAAGGGTCCAGAGTGCACGATCCCTCCAAAAACACCACCTCAGTGGGATACTCCAAGCTAGGGTCTTCTTGTAGCTCCATATGTAACTTCAAAGACGTTGTTCATGGCAACACCCGAGTTGTTCACAGACCCGATAACTCCTCCCCCGAAAGTAGCGCCCTGGGTCAGCAAACCGGGTTACTGAGTCGGAAACCTCCCAGTAACGCATCAACTCGCTCCACTAAATCCAACGCCCCACCATCCTACACGACGTCTTCCAGGGGCATGCAATTTAGGAAACTCTCAGGCTGTTATGAATGTCACATGATCGTCGACCCCTCCAGGCTTCCAATCCCCAGAAGTACTCTCTGTTCTTGCTCTCAGTGTGGAGAGGTCTTCACCAAGATGGAAAGCTTGGAGCTTCATCAAGCTACTCGTCATGCCGTGTCAGAGCTGGACCCGGAGGATTCGGGCCGAAACATCGTGGAGATAATATTCAAATCAAGCTGGCTCAAGAAGGGAAGCCCAATCTGCAAGATCGAACGGATATTAAAAGTCCACAACACCCAGCGCACCATCCAACGGTTCGAGGAGTGCCGAGACGCAGTGAAGAGCCGTGCTCACCACAGCACCAAAAAGAACCCCCGATGCGCCGCCGACGGCAACGAGCTCCTCCGCTTCCACTGCAGCAGTCTATCGTGCGCCTTGGGCGCACGTGAATCGTCCAGCCTGTGCTCCTCCGTACCCGGCTGCGGCGTCTGCACCATCATCAGGCACGGATTTCAGGGCAAGTCCGGGGGTGGTTCTGACGGCGGCGGCGGCGGCGAGCACTACAAGGGAGTGCGGACGACGGCGAGCAGTGGCAGGGCCCACGACGCCTTGCAGTGCGGCGAGGTCAGAAGAGCGATGCTGGTGTGCCGTGTGATCGCGGGGAGGGTGAAGCGCGTGGCGGAAGAGACGCCGTCGGAGGAGGAGACTGTGTCGGCTGGGTCTTACGATTCTGTTGCGGGGTACGCCGGTATCTACTCGAATCTGGAGGAGTTAGTTGTGTTCAATCCAAGGGCTATCCTGCCTTGTTTTGTTGTGATTTACAAAGTAGTTCCATGTTGA 1257 0.5545 MALLTFLPEQSGSDPKSQLPKRKRKQHHKQKQKQKQKQKPASSWDQIKNLLTCKQIQGSRVHDPSKNTTSVGYSKLGSSCSSICNFKDVVHGNTRVVHRPDNSSPESSALGQQTGLLSRKPPSNASTRSTKSNAPPSYTTSSRGMQFRKLSGCYECHMIVDPSRLPIPRSTLCSCSQCGEVFTKMESLELHQATRHAVSELDPEDSGRNIVEIIFKSSWLKKGSPICKIERILKVHNTQRTIQRFEECRDAVKSRAHHSTKKNPRCAADGNELLRFHCSSLSCALGARESSSLCSSVPGCGVCTIIRHGFQGKSGGGSDGGGGGEHYKGVRTTASSGRAHDALQCGEVRRAMLVCRVIAGRVKRVAEETPSEEETVSAGSYDSVAGYAGIYSNLEELVVFNPRAILPCFVVIYKVVPC 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0624 418 Gene3D - 189 415 - -
Bisa05g0624 418 MobiDBLite consensus disorder prediction 95 143 - -
Bisa05g0624 418 MobiDBLite consensus disorder prediction 97 143 - -
Bisa05g0624 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 173 201 IPR013087 -
Bisa05g0624 418 SUPERFAMILY ADP-ribosylation 198 414 - -
Bisa05g0624 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 42 413 - -
Bisa05g0624 418 MobiDBLite consensus disorder prediction 1 45 - -
Bisa05g0624 418 MobiDBLite consensus disorder prediction 20 36 - -
Bisa05g0624 418 ProSitePatterns Zinc finger C2H2 type domain signature. 173 196 IPR013087 -
Bisa05g0624 418 FunFam C2H2-like zinc finger protein 197 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0624 Bisa-ChrBisa05 10235653 10237932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0624 1 416 C2H2 Transcription Factor Family AT1G75710 62.955 1.17e-177 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa05g0624 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0624 05 10235653 10237932 Bisa05g0624 05 10235653 10237932 ECH