Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0603 ATGACTCTCGAAGATTTCTTTACCTTGACTGAGATGAAAGATGGGCTCACGGCCCCTTCCCGTGTACAGGAGCTTGTCTCTGTAATGCAGAAGGAGAAAGATGGTGTGGTTAAGAATGTTGGTGATGCGACAAGGCAGTGGGCTACTGTTGCAAGCACTGTTGCTGCCACAGATAACAAAGGCTGTCTTGATCTTTTTATTCAATTAGATGGACTCTGGTACATTAATAGGTGGTTAAAGGATGCCCAAGATTTTGGTGTTGACACAAATGATGGCTTCATTGAGGAGTCAATTACTGCACTGTTACGAGCAGTTGAAAAGCTGCATCTAGACAGTGAAAAGTCAGTATCATCAGGAATTTGGGTAACCGTTAAAAATCTTCTTGGCCACCATAGCTCTAGGGTTCAGGATAGTGCAAGAGCATTATTTGATAGCTGGAAGGTGGATGGAAATGGTGATGCGGATATTCATGATATGAAGCTTGTCAAAGTCAATGATAGAACTGACAAAATTTTCAGGGAGGAAGGTCAGCCATCTTCTGTGAATGAAGCTGGTAATGATAATGATCAGGCATCGAGACTTGTAGAAGGTGAGAAATCTCCATTGAGGAGCAAAGATACTGTACTACCAGAAAGAAGTATCAATGCACAGATAGAAAGTTCTAACAATCAGCTCCATTCCCATGTAAGTTTGGATCATGAAGATGGCAAACTGAGATCACCAGACCATCCTGCCAACATGTCAACATCTGCTCAAGATGAGAGCACTTCTGAAGGGACTTGTAACTTTTCTGTTAGCAAACAAGGCAATGTTGAAGGACAATCAGATGTTTCAAAGTTAAAGGACTTATCTGAAATGGAGAAGCACGAGCAAAGTGATAGTGGTCCTCGAGAAAAAGCATTAGTGGCAGAGAACTCTTTGGCATCAACCGGGTCAGAGCTTGGCCCTGTTTCAGAGGATGCTACTGAGGCAAAAGCTCTGGAATCAGTAAAAGAGCCTGCTTTACAACATAATATTGAAAATAATGAGGATGTCTGTCATAAAATAACTGCTTCTGGTAGCGTGAGGACAGCCACATCCGATAGAAAGAGTGGGGAAGATGATAGTAGAGCTATAGATTCCAGCAGTCCACAACTTTTGAAGATTGCAGAAAAAGATGATGACTGTTTTATTACTTCACATGACTCATCAATCAGCTGCAGTAACTCAAGAAAGCCTGAGGTGATAGAGACATCTTTTTCCAAAACAGATTATGTCAGATCAGTGAAGGAGGGCAGGGGACATGTTAGTAATGAAGGCGAGGATACCTCAAATGGCTCTGATTCTGTTAAACGAGGAAGAGTTCCCAGAAGCCCCAATGTGATTGACAAGAAGAGTTCTGACATTGAACTTGAGTATGGCATTGTTGATGCTTTAGAAGTTGCTCGACAAGTTGCTCAGGAAGTTAGGAGAGAAGTTTGCAGCTCTTCTTCAGAAAAAATCTCAGAAGGTGGAACCCAGCAACCAGGCAGCCCAGATTCCATAAAAAGAGAGGATGAACACACTTGTGTCCCCCCTGAGGAGGTCTCATCTGGGAAAAACTGCTCTCCTGAGAAATGTTCTGAGGAAGTGGGACATGCAAGTACTTCAGACATTGTTGAGGCTGCTCCGGAAAGCACAACTGCTGTGGAGTCCTCTCAGGTGACTGAAGTAGCTCAAGATCCAGGAGGTAACTCAGAGAAAATTCAGTGTGCTTTTGATCTCAATGAAGTTGGTTCTGATGATATGGATGTTTCTGTAAATGCTATGTCTACGCCAATACCTGTTGTCTCTGCTTCAAAGCCAGTAGCAACTTCTGAGTTGCCTGCAGCACCTTTGCAGTTTGAGGGGACACTCGGGTGGAAAGGATCTGCTGCCACCAGTGCCTTTCGTCCTGCATCACCTCGTAAAAATTCTGATGTTGAGAAAAATCTTTCTGCTGGTGGAAACTCTGATATTTCTAAGCAGAGGCAGGATTGGCTTAATATCGATCTGAATGTAGCTGAGAGTGAAGATGGATTGGGAAAACAAATTGCTGAATCATCAAGCCTTCCTTCCGGGCAATCTTCAGTTGAACTTAGTTCTAAAAGATCGAGCAGACTCGAATTGGATTTGAACATTATTGGTGATGATGGTGATGCCCAACCTTCAGACCAGAGGATGGATGGACAGCTTTTTTACGGCAGAAGTGGCTATTGGAGCTCATCACCTGCATCAGCATCGCCATCAATGCAACCTTCTGGCAGAAACATTGATTTGAATGACAGCCCATACCTTCAAACAGATTTGGTGGACCAAGTCCCCAGTAAGTCTTCGTATAATATTGATGCATATGGGGGGTCTAGATCAGATGGTCCTGTTATCTCTATTTTGGGGACGAAGGTGGAAGTTGGGAGAAGAGAATTTGTTCCTCATTCTCTGTCTTTGCCAAATGGCAAGTCTATTGAGCCTGTAATGGATCTTACAATGTCAAGAGCAGGTGGAGTTTTAGGGATGGGACCCACATTATCCTACAATCATTCACATGGTTTTGGGTATAATGGTCTCTCATCAGCTGTATATGGGTCAAGTGGCACAATTCCATACATGGTGGACTCAAGAGGAGCTCCAGTTGTGCCTCAAGTTGTGGGGTCTTCGTCAAGTCTTCTGTCATCTTATTCTCAGCCTTCATTCATCATGAGCTTGCCTGGTGCACAACTTGGTTTAAATGGAGTTGGAACGTTGCGTCCTAACTTTGACCTAAATTCTGGCCTTATGATTGAGGGCGGGAATAGGGATGCAATGACTGCAAGGCAATTTTTCTTCCCTGGTCAGAACAGGGTTATGGAGGAGCATGTAAGGACAATTCCACAGCCCTCTAGTTCCGGGGTTGGTGTGAAAAGAAAAGAACCAGACAGTGGGTGGGAAACATTCCCAATGAGCCACAAACATCCGCAGGCTCCATGGAAGTAG 2970 0.4394 MTLEDFFTLTEMKDGLTAPSRVQELVSVMQKEKDGVVKNVGDATRQWATVASTVAATDNKGCLDLFIQLDGLWYINRWLKDAQDFGVDTNDGFIEESITALLRAVEKLHLDSEKSVSSGIWVTVKNLLGHHSSRVQDSARALFDSWKVDGNGDADIHDMKLVKVNDRTDKIFREEGQPSSVNEAGNDNDQASRLVEGEKSPLRSKDTVLPERSINAQIESSNNQLHSHVSLDHEDGKLRSPDHPANMSTSAQDESTSEGTCNFSVSKQGNVEGQSDVSKLKDLSEMEKHEQSDSGPREKALVAENSLASTGSELGPVSEDATEAKALESVKEPALQHNIENNEDVCHKITASGSVRTATSDRKSGEDDSRAIDSSSPQLLKIAEKDDDCFITSHDSSISCSNSRKPEVIETSFSKTDYVRSVKEGRGHVSNEGEDTSNGSDSVKRGRVPRSPNVIDKKSSDIELEYGIVDALEVARQVAQEVRREVCSSSSEKISEGGTQQPGSPDSIKREDEHTCVPPEEVSSGKNCSPEKCSEEVGHASTSDIVEAAPESTTAVESSQVTEVAQDPGGNSEKIQCAFDLNEVGSDDMDVSVNAMSTPIPVVSASKPVATSELPAAPLQFEGTLGWKGSAATSAFRPASPRKNSDVEKNLSAGGNSDISKQRQDWLNIDLNVAESEDGLGKQIAESSSLPSGQSSVELSSKRSSRLELDLNIIGDDGDAQPSDQRMDGQLFYGRSGYWSSSPASASPSMQPSGRNIDLNDSPYLQTDLVDQVPSKSSYNIDAYGGSRSDGPVISILGTKVEVGRREFVPHSLSLPNGKSIEPVMDLTMSRAGGVLGMGPTLSYNHSHGFGYNGLSSAVYGSSGTIPYMVDSRGAPVVPQVVGSSSSLLSSYSQPSFIMSLPGAQLGLNGVGTLRPNFDLNSGLMIEGGNRDAMTARQFFFPGQNRVMEEHVRTIPQPSSSGVGVKRKEPDSGWETFPMSHKHPQAPWK 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0603 989 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 18 149 IPR035441 -
Bisa05g0603 989 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 989 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 243 277 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 233 379 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 680 703 - -
Bisa05g0603 989 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 62 147 IPR035441 -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 637 659 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 278 297 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 491 505 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 394 461 - -
Bisa05g0603 989 ProSiteProfiles TFIIS N-terminal domain profile. 73 153 IPR017923 -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 956 989 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 546 569 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 632 659 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 480 574 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 345 359 - -
Bisa05g0603 989 Pfam TFIIS helical bundle-like domain 101 147 IPR017923 -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 417 431 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 394 416 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 682 702 - -
Bisa05g0603 989 MobiDBLite consensus disorder prediction 173 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0603 Bisa-ChrBisa05 9996407 9999376 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bisa05g0603 Med26 5e-05 No_clan