Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0584 ATGGTTACCGCAACTGATTCTTCTTCTAACCATCACTCGCCGACTAGTGCCGGGGACATCAATAGCCCTAAGTTCCCGCGAAAAAATCTACCATCTCCGTGGGCTCAAGTCGTACGAGGTGGTGAACCTGAATTAAACTCCGGCATTCGCCCGTCGCCGTCGCCGCCGTCATCCTCTTCTTCGTCGTCGTCACTTACTGCTTCTGTGACCGATCAACCACCATTATCTGATTCCTCTCCGAACGCTGCTTCTTCGTCGCCTCCGCTGGATAATTCTAATTTTGCTGGCGCTGACAGCACTGATACTAATGACGGCAATGCGGATCGTCCTAGGAGGCCCGCTTGGAACCGGCCTTCTAACGGCGTTGTTGAGGCTGGTCCTGTAATGGGTGCTGTCTCTTGGCCTGCTTTATCCGAATCCACCAAGGCTTCCACTAAATTGTCAGCTGACTCGTCCTCTAAGACTGTCATGGATGGATCACTCTCCACTTCTCAGGGTTCTGGCGCTTCGAACTCGCCTAAAAAACAAGCTATTAGTAATGCAAAGCCTAATTCTGCAACGAACTATTCTGTGCATCATAGACAAAGATCAATGAAGCGTGGAGGTAGCAACAGTGTTGGAGCTGCTCATGCACGGAGCAGCTTCCCCAATCCTCCCCCAGCTCCCCCACCACCACCCTTTCCTGTATTTCAAATCCCGCCTAGTAGCTATGGTAATGTGGTACCAGGGGTTCCAGATCCTTCTCCAAGAGAAGCCCCATTCAGGAACAATAACTGGGATGCAAGACCACCGGTTGGGGGTTTTGTGCCTCCAGTGAATGATCATTGGAATCCCCCCCGTAGAGGCAACTTTGGTCCCCATCTACGTGGAGATGGACACTATCATAATAATCATGGGGCTAGGCGTGAACAGGATCGTAATAGAGATGCTCATGTACACCAACCGAGGATGTCTCCTAGGGGATTAGTGAGGCACGCGCCTCCTAATACTCCTGCATTTGTTGCCCCTCCTTCCATGGGACCCTTTGCAAACCCTGTGGGTTTTCCAGAATTCTATTATTTCCCAACTTTACCACTGGAACCGTTCAGGGGTATGCCTTTCTTTACTCATGGTCCTCCTCCTGCAATGTTCTTCCCTGTTGCAGAACCTCCTCTGACCAATATGATAGTGAACCAAATTGATTACTACTTTAGTGATGCTAATCTAGTGAAAGATGAGTTTTTAAGATCCAACATGGATGAACAGGGTTGGGTTCCCATTACTTTGATAGCGGGCTTCCGTCGGGTTAAAAATTTGACAAGCAACATCCAGGTGATACTGGATTCAATGAGACATTCCACGGTTGTGGAAGTTCAGGGTGACAAGGTGCGGAGGCGTTATGAATGGACAAAGTGGCCGCCCTCATCTCAATTTCGAGGTGATTCTGGTACATTATCTCCCGGTGGATCAAGTTACAATAACCTAGCAGCTGATTTTCACAAGATTGCTCTGGGAGAAGCAGCTACAGATAAAGGTAATTCAGACCCTACTTCAGAGGCCTTTTCAGGACGATCTCCAACAGATTCTTCCCGTCAATCTCAACAACTCCCAAACGGCGATACTACAGAGAACACCAATTAA 1620 0.4889 MVTATDSSSNHHSPTSAGDINSPKFPRKNLPSPWAQVVRGGEPELNSGIRPSPSPPSSSSSSSSLTASVTDQPPLSDSSPNAASSSPPLDNSNFAGADSTDTNDGNADRPRRPAWNRPSNGVVEAGPVMGAVSWPALSESTKASTKLSADSSSKTVMDGSLSTSQGSGASNSPKKQAISNAKPNSATNYSVHHRQRSMKRGGSNSVGAAHARSSFPNPPPAPPPPPFPVFQIPPSSYGNVVPGVPDPSPREAPFRNNNWDARPPVGGFVPPVNDHWNPPRRGNFGPHLRGDGHYHNNHGARREQDRNRDAHVHQPRMSPRGLVRHAPPNTPAFVAPPSMGPFANPVGFPEFYYFPTLPLEPFRGMPFFTHGPPPAMFFPVAEPPLTNMIVNQIDYYFSDANLVKDEFLRSNMDEQGWVPITLIAGFRRVKNLTSNIQVILDSMRHSTVVEVQGDKVRRRYEWTKWPPSSQFRGDSGTLSPGGSSYNNLAADFHKIALGEAATDKGNSDPTSEAFSGRSPTDSSRQSQQLPNGDTTENTN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0584 539 FunFam la-related protein 1B isoform X2 375 465 - -
Bisa05g0584 539 MobiDBLite consensus disorder prediction 1 234 - -
Bisa05g0584 539 ProSiteProfiles La-type HTH domain profile. 379 468 IPR006630 -
Bisa05g0584 539 Pfam La domain 389 444 IPR006630 -
Bisa05g0584 539 MobiDBLite consensus disorder prediction 1 22 - -
Bisa05g0584 539 MobiDBLite consensus disorder prediction 137 192 - -
Bisa05g0584 539 SMART la 383 459 IPR006630 -
Bisa05g0584 539 MobiDBLite consensus disorder prediction 215 232 - -
Bisa05g0584 539 MobiDBLite consensus disorder prediction 51 103 - -
Bisa05g0584 539 MobiDBLite consensus disorder prediction 499 539 - -
Bisa05g0584 539 PANTHER LUPUS LA PROTEIN-RELATED 131 478 IPR045180 -
Bisa05g0584 539 MobiDBLite consensus disorder prediction 504 539 - -
Bisa05g0584 539 SUPERFAMILY "Winged helix" DNA-binding domain 376 467 IPR036390 -
Bisa05g0584 539 MobiDBLite consensus disorder prediction 287 315 - -
Bisa05g0584 539 MobiDBLite consensus disorder prediction 287 325 - -
Bisa05g0584 539 CDD LAM 387 458 - -
Bisa05g0584 539 Gene3D - 379 468 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0584 Bisa-ChrBisa05 9555793 9560282 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0584 05 9555793 9560282 Bisa05g0584 05 9555793 9560282 ECH