Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0572 ATGGGCTTCTGCTTCAGTAAATCCCATAGCCCTCCCTCCTCTGATTCACCGCCCCATCGTTACCAACCACTTTCTAAGGCAAAACCTCAATCTCCTCGCCCTCCATACCCACCCTCACACACACAATCAGCTCCTCCTTCCTACGACGCTTCCTCGTCTTCTTCTCGATCTCTAGTGGGACCAGTTCTAGGGAAACCATATATTGACATAAAGAAGCTATATAGTTTTGAGAAAGAACTGGGGAGGGGTCGATTCGGGATTACTTATCTTTGCACGGAGAAGGCGACGAGAGTGAAGTACGCTTGCAAGTCCATAGCTAGGCGAAAGCTGAGTAGCAGGAAGGGGATTGAAGATGTTAAGAAGGAAATCATGATCCTTCAGCACCTTATGGGACAGCCCAATATAGTGGAATTCAAGGGTGCTTATGAAGATAGGATGAGTGTGCACTTGGTAATGGAGTTGTGCTCCGGTGGGGAGCTTTTCGATCGGATAATTGAGAAGGGGAATCATTCGGAACGCGAGGCTGTCATCATATTCAGGCAAATAATGAATGTGGTGCACGCTTGTCATTTTATGGGCGTGATGCATAGGGACTTGAAGCCTGAGAATTTCTTGCTGGCTGCTAAAGATCCTAATTCATTCTTAAAAGCCACAGATTTTGGACTATCTGTATTCATCGAGGAAGGTAAAGAGTATAAGGAAATTGTGGGAAGTGCATACTATGTGGCCCCAGAGGTACTAAAACGGAATTATGGAAAGGAGATAGATGTGTGGAGTGCAGGAGTCATTTTATACATCCTCCTAAGTGGGGTTCCTCCATTTTGGGCTGAGACCGAGAGAGGCATATTTGATGCCATTTTGGAAGGCAAATTAGATCTTGAAAGCCAGCCATGGCCTTCTGTTTCAGATTCTGCCAAGGATCTCATCAGGAAAATGTTGATAAATGACCCTAAGAAGCGCATTACTGCTGCTGAAGCCCTTGAACACCGGTGGATGAAGGAAGGTGGTCAAGCATCTGACAAGCCTATAGATAGCGCTGTTTTAATTAGGATGAAGCAGTTCAGAGCAATGAATAAGATGAAGAAACTTGCTCTGAAGGTAATAGCAGAGAACCTTTCAGAGGAAGAAATAAAGGGCTTGAAACAAATGTTCAACAATATGGATACTGATAGCAGTGGCACAATCACATTGGAAGAACTCAAATCTGGATTGACCAAACTGGGATCTAAACTCAACGAGTCTGAACTTCGGCAGCTGATGGATGCTGCTGATGTTGACAACAGTGGGACTATTGATTATTATGAATTCATCACTGCCACCATGCATCGGCATAGACTTGAGAAAGAAGAGAATTTGTTTCAGGCTTTCCAGTACTTCGACAAGGATAACAGTGGATTTATAACAAGAGAGGAGCTAAGACAAGCTATGACTGAACATGGAATAGCAGATGAAGCTACTATAGATGAAGTCCTTAACGACGTTGACACTGATAAAGATGGCAGAATCAATTACGAGGAGTTTGTGGCTATGATGAAAAGCGCAGGATAA 1548 0.4399 MGFCFSKSHSPPSSDSPPHRYQPLSKAKPQSPRPPYPPSHTQSAPPSYDASSSSSRSLVGPVLGKPYIDIKKLYSFEKELGRGRFGITYLCTEKATRVKYACKSIARRKLSSRKGIEDVKKEIMILQHLMGQPNIVEFKGAYEDRMSVHLVMELCSGGELFDRIIEKGNHSEREAVIIFRQIMNVVHACHFMGVMHRDLKPENFLLAAKDPNSFLKATDFGLSVFIEEGKEYKEIVGSAYYVAPEVLKRNYGKEIDVWSAGVILYILLSGVPPFWAETERGIFDAILEGKLDLESQPWPSVSDSAKDLIRKMLINDPKKRITAAEALEHRWMKEGGQASDKPIDSAVLIRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDSSGTITLEELKSGLTKLGSKLNESELRQLMDAADVDNSGTIDYYEFITATMHRHRLEKEENLFQAFQYFDKDNSGFITREELRQAMTEHGIADEATIDEVLNDVDTDKDGRINYEEFVAMMKSAG 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0572 515 SUPERFAMILY EF-hand 371 511 IPR011992 -
Bisa05g0572 515 Gene3D - 373 441 - -
Bisa05g0572 515 FunFam Calcium-dependent protein kinase 1 340 515 - -
Bisa05g0572 515 MobiDBLite consensus disorder prediction 1 58 - -
Bisa05g0572 515 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Bisa05g0572 515 SUPERFAMILY Protein kinase-like (PK-like) 74 340 IPR011009 -
Bisa05g0572 515 SMART serkin_6 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0572 515 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Bisa05g0572 515 PANTHER SERINE/THREONINE-PROTEIN KINASE 70 507 - -
Bisa05g0572 515 FunFam Calcium-dependent protein kinase 1 76 159 - -
Bisa05g0572 515 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Bisa05g0572 515 Gene3D Transferase(Phosphotransferase) domain 1 160 340 - -
Bisa05g0572 515 MobiDBLite consensus disorder prediction 28 42 - -
Bisa05g0572 515 ProSiteProfiles EF-hand calcium-binding domain profile. 483 515 IPR002048 GO:0005509
Bisa05g0572 515 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Bisa05g0572 515 MobiDBLite consensus disorder prediction 43 58 - -
Bisa05g0572 515 FunFam calcium-dependent protein kinase 1 160 339 - -
Bisa05g0572 515 ProSitePatterns EF-hand calcium-binding domain. 495 507 IPR018247 -
Bisa05g0572 515 CDD STKc_CAMK 74 331 - -
Bisa05g0572 515 Gene3D Phosphorylase Kinase; domain 1 76 159 - -
Bisa05g0572 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Bisa05g0572 515 ProSiteProfiles Protein kinase domain profile. 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0572 515 Gene3D - 350 511 - -
Bisa05g0572 515 Pfam Protein kinase domain 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0572 515 SMART efh_1 451 479 IPR002048 GO:0005509
Bisa05g0572 515 SMART efh_1 379 407 IPR002048 GO:0005509
Bisa05g0572 515 SMART efh_1 486 514 IPR002048 GO:0005509
Bisa05g0572 515 SMART efh_1 415 443 IPR002048 GO:0005509
Bisa05g0572 515 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Bisa05g0572 515 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Bisa05g0572 515 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Bisa05g0572 515 Pfam EF-hand domain pair 380 440 IPR002048 GO:0005509
Bisa05g0572 515 Pfam EF-hand domain pair 449 512 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0572 Bisa-ChrBisa05 9373804 9378035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0572 4 514 EF-hand Containing Proteins AT4G04720 65.966 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa05g0572 Pkinase 1.5e-71 CL0016