Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0564 ATGAAATGCTACGTGAACCAGAGCTTCAATCACAGAGATGCAAATTGGAATGCTGGCTCCAAGGAGGAGTTGGATGATGACGGGAACGTCTTCCCCGTATGTAATAATGAAAAGAATTCTCTTGCGCCCATATGTTTTGATCCTCCTCCAACACTTACAATTCCAAATTTCCATCCAAGTCCTCTTCAATCGTTTTCCATGGCCACCGTCACCTCCGCCGCCGTCGCTATTCCCTCCTTCACCGGCCTTAAGGCAGCCCCCACAACCGCCACCAAAGTCACCTCCGCGGCCGCACCAAAGGCACTTCCAAGGTCCGGCGTTAAGGCTTCCCTCAAAGACGTTGGAGTAGCCGTCGTGGCCACCGCCGCAAGCGCAATGCTAGCTAGCAACGCCATGGCCGTCGAGGTGTTGCTCGGAGGCGACGACGGTTCTCTGGCTTTTGTTCCCAGCAACTTCTCAGTTAGCACTGGAGAAAAGATTGTGTTCAAGAACAATGCTGGTTTCCCTCACAATGTTGTGTTCGACGAGGACGAGATTCCTGGCGGTGTTGACGCATCGAAGATCTCCATGTCCGAGGAAGACCTTCTCAATGCCCCCGGCGAGACTTACGTTGTTACCTTGACCGAAAAGGGAAGCTACAGTTTCTACTGTTCCCCTCACCAAGGAGCTGGAATGGTAGGGAAAGTCACTGTTAATTAA 699 0.5207 MKCYVNQSFNHRDANWNAGSKEELDDDGNVFPVCNNEKNSLAPICFDPPPTLTIPNFHPSPLQSFSMATVTSAAVAIPSFTGLKAAPTTATKVTSAAAPKALPRSGVKASLKDVGVAVVATAASAMLASNAMAVEVLLGGDDGSLAFVPSNFSVSTGEKIVFKNNAGFPHNVVFDEDEIPGGVDASKISMSEEDLLNAPGETYVVTLTEKGSYSFYCSPHQGAGMVGKVTVN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0564 232 PRINTS Type I copper blue protein family signature 168 183 IPR001235 GO:0005507|GO:0009055
Bisa05g0564 232 PRINTS Type I copper blue protein family signature 153 166 IPR001235 GO:0005507|GO:0009055
Bisa05g0564 232 PRINTS Type I copper blue protein family signature 209 223 IPR001235 GO:0005507|GO:0009055
Bisa05g0564 232 PRINTS Plastocyanin signature 139 158 IPR002387 GO:0005507|GO:0009055
Bisa05g0564 232 PRINTS Plastocyanin signature 162 180 IPR002387 GO:0005507|GO:0009055
Bisa05g0564 232 PRINTS Plastocyanin signature 211 230 IPR002387 GO:0005507|GO:0009055
Bisa05g0564 232 Pfam Copper binding proteins, plastocyanin/azurin family 135 232 IPR000923 GO:0005507|GO:0009055
Bisa05g0564 232 SUPERFAMILY Cupredoxins 131 232 IPR008972 -
Bisa05g0564 232 ProSitePatterns Type-1 copper (blue) proteins signature. 211 225 IPR028871 -
Bisa05g0564 232 Gene3D - 134 232 IPR008972 -
Bisa05g0564 232 PANTHER PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED 104 232 - -
Bisa05g0564 232 CDD Plastocyanin 134 232 IPR002387 GO:0005507|GO:0009055
Bisa05g0564 232 NCBIfam plastocyanin 134 232 IPR002387 GO:0005507|GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0564 Bisa-ChrBisa05 9268578 9271299 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0564 05 9268578 9271299 Bisa05g0564 05 9268578 9271299 ECH