Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0543 ATGGAAGCCGAATTATCAATTAACAGCGAGGGACAGCCTATCAAATGCAAAGCGGCGGTCAGTCGGAGTCCCGGCGATCCGTTAGTTATCGAGGACGTCATCGTGGCGCCGCCGATGCCTCGTGAAGTTCGGATCCGTATCATATGCACTTCTCTCTGCCACAGCGATATCACATTCTGGAGGATGAAGGAACTTCCTGGAATTTGCCCACGAATTCTGGGCCACGAGGCTGTCGGGGTTGTGGAAAGTCTAGGAGAGGGCGTAAGTGAAGTTAAAAGAGGAGATATGGTTCTGCCAGTGTTCATACCAGAATGTGGAGAGTGTGAAGACTGCAAGTCAATGAAGAGCAACCTGTGTTCAAATCTGTGTTTCGAGGTGTCTCCATGGCCGCTCAGACATGGAAGCAGCAGATTCAGGGACCTTGAAGGGAACATCATACACCATTTTCTGTTCGTTTCAAGTTTCAGCGAGTACACAGTGATGGACGTTGCCAATTTGGTGAAGATTGATCCCACAATTCCTCCCAACAGGGCATGCCTCCTCAGTTGCGGTGTATCCACTGGAGTAGGTGCTGCTTGGAGGACAGCACAGGTGGAGGCAGGTTCTACGGTTGCTATCTTTGGGCTCGGCTCCATTGGATTAGCAGTTGCAGAGGGTGCTAGACTTTGTGGAGCAGCGAGGATTATTGGTGTGGATGTGAACCCAAAAAAATTTGAAATTGGAAAGAAGTTTGGACTCACTGACTTCATCAACAGTAAAGATTGTGGGGACAAATCTGTTAGCCAGGTCATTCATGATATAACTGGCGCTGGAGTAGATTATTGCTTTGAATGCGTTGGAATGGCATCATTAGTGCATGAGGCATTCGCTTCCTGTCGAAAGGGTTGGGGAAAAACAATAGTCGTGGGGCTCGACAAGCCAGAGGCCATGTTGAGCCTTAGCTCCTTCGAGGTCCTTCACGCTGGGAAATGCCTCATGGGATCCATATTTGGAGGACTCAAACCCAAGTCCCACATCCCTGTGCTCCTTAAACGTTACACGGACAAGGAACTGCAATTGGATGATTTTGTGACACATGAGGTGGACTTTAAGGACATAAATAAAGCTTTTGATTTACTGCTCCAAGGACAGTGTCTTCGGTGTGTGATTTGGATGGACAAATAA 1164 0.4828 MEAELSINSEGQPIKCKAAVSRSPGDPLVIEDVIVAPPMPREVRIRIICTSLCHSDITFWRMKELPGICPRILGHEAVGVVESLGEGVSEVKRGDMVLPVFIPECGECEDCKSMKSNLCSNLCFEVSPWPLRHGSSRFRDLEGNIIHHFLFVSSFSEYTVMDVANLVKIDPTIPPNRACLLSCGVSTGVGAAWRTAQVEAGSTVAIFGLGSIGLAVAEGARLCGAARIIGVDVNPKKFEIGKKFGLTDFINSKDCGDKSVSQVIHDITGAGVDYCFECVGMASLVHEAFASCRKGWGKTIVVGLDKPEAMLSLSSFEVLHAGKCLMGSIFGGLKPKSHIPVLLKRYTDKELQLDDFVTHEVDFKDINKAFDLLLQGQCLRCVIWMDK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0543 387 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Bisa05g0543 387 SUPERFAMILY GroES-like 336 384 IPR011032 -
Bisa05g0543 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Bisa05g0543 387 PANTHER ALCOHOL DEHYDROGENASE 11 383 - -
Bisa05g0543 387 Gene3D - 188 328 - -
Bisa05g0543 387 FunFam S-(hydroxymethyl)glutathione dehydrogenase 188 328 - -
Bisa05g0543 387 FunFam Alcohol dehydrogenase 6 19 200 - -
Bisa05g0543 387 SUPERFAMILY GroES-like 9 200 IPR011032 -
Bisa05g0543 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 348 IPR036291 -
Bisa05g0543 387 Pfam Zinc-binding dehydrogenase 212 332 IPR013149 -
Bisa05g0543 387 Gene3D - 19 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0543 Bisa-ChrBisa05 8838367 8844272 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0543 41 375 Monolignol Biosynthesis Gene Families AT2G21730 25.215 2.30e-11 62.8