Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0535 ATGGGCTGTTGTGTATCTTCCACTTCCGGCGATAAAGTTGTCCAGAACAGCCCTCATTACGATCATCAGAAAAACAACAGCCACAATACAGCTTCATCCTCCAACGGCGCGGATAATATCGCTGCTGACGGTGACTTTCCGCCGTTCTTGCAGTTCTCCTTCGCCGACCTCAAAGCCGCCACCAATAACTTCAGCGCCGATCACATCGTCTCCGAGAGCGGCGAGAAAGCCCCCAATGTCGTCTACAAAGGTCGCCTTCAGAACGACAACCACCGTTCGATTGCCGTCAAGAAATTCACTAAATCGGCCTGGCCCGATCCTAAGCAGTTCGCGGACGAAGCTCTGGGTGTTGGGAAATTAAGACACACAAGGATTGCCAATTTGATTGGTTACTGTTGTGATGGGGATGAGAGACTTCTTGTTGCAGAGTATATGCCCAACGACACCCTCGCCAAACATCTATTTCACTGGGAGAATCAGACAATTGAATGGGCTATGCGGTTAAGAGTTGCCCTAAACATTGCCCAAGCATTACATTATTGTCATAGTGAAGGCCATCCATTGTACCATGACTTGAATGCTTACCGAATTCTCTTTGATGAGAATGGTGATCCCCGGCTTTCATGTTTTGGTTTGATGAAGAATAGCATGGATGGGAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAGTATCTGAAAAATGGGAGGGTGACGCCTGAAAGTGTTATCTTCAGTTTTGGGACTGTGTTATTGGATCTTCTAAGTGGCAAGCATATCCCTCCAAGTCATGCTCTTGATATGATAAGGGGCAAAAATAACCTTCTCCTTATGGATTCACATTTGGACGGAAAATTTTCAACTGATGAAGCCACAGTGGTTTTGGGTCTTGCCTCACAATGTTTGCAGTATGAACCTAGGGAGAGGCCCAACACAATGGACCTTGTTGCAAAACTCTCCCCACTACAAAATAAACCTGATGTTCCATCAAGTGTAATGCTTGGAATTCCAAAACATGAGGAAGCACCTCCTACACCACAGCATCCTCTCTCTCCAATGGGTGATGCTTGTTCTCGTATGGACCTTACAGCTATACATCAAATTTTCTTAATGACACACTACAGAGATGATGAAGGGACTAATGAGTTATCTTTCCAAGAGTGGACCCAGCAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGTGACTTGGCATTTCGTGACAAGGATTTTAACACTGCAATTGAGTGTTATTCCCAGTTTATCAATGTGGGAACAATGGTATCCCCAACTGTATATGCGCGGAGGAGTCTTTGCTATCTGCTGTGCGATCAACCAGATGCTGCTCTGAGAGATGCAATGCAAGCTCAGTGTGTTTATCCTGAATGGTCCACAGCATTTTACATGCAGGCCGTTGCTCTCTCCAAATTGAACATGCACAAGGATGCTTCTGACATGCTCAATGAGGCTGCCGCCCTCGAAGACAAAAGACGAGGCAAAGGCTGA 1509 0.4586 MGCCVSSTSGDKVVQNSPHYDHQKNNSHNTASSSNGADNIAADGDFPPFLQFSFADLKAATNNFSADHIVSESGEKAPNVVYKGRLQNDNHRSIAVKKFTKSAWPDPKQFADEALGVGKLRHTRIANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALNIAQALHYCHSEGHPLYHDLNAYRILFDENGDPRLSCFGLMKNSMDGKSYSTNLAYTPPEYLKNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNNLLLMDSHLDGKFSTDEATVVLGLASQCLQYEPRERPNTMDLVAKLSPLQNKPDVPSSVMLGIPKHEEAPPTPQHPLSPMGDACSRMDLTAIHQIFLMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFNTAIECYSQFINVGTMVSPTVYARRSLCYLLCDQPDAALRDAMQAQCVYPEWSTAFYMQAVALSKLNMHKDASDMLNEAAALEDKRRGKG 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0535 502 SUPERFAMILY Protein kinase-like (PK-like) 48 327 IPR011009 -
Bisa05g0535 502 ProSiteProfiles Protein kinase domain profile. 67 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0535 502 FunFam probable serine/threonine-protein kinase At4g35230 39 144 - -
Bisa05g0535 502 Gene3D Phosphorylase Kinase; domain 1 42 144 - -
Bisa05g0535 502 MobiDBLite consensus disorder prediction 1 38 - -
Bisa05g0535 502 FunFam probable serine/threonine-protein kinase At5g41260 146 337 - -
Bisa05g0535 502 Gene3D Tetratricopeptide repeat domain 394 500 IPR011990 GO:0005515
Bisa05g0535 502 Gene3D Transferase(Phosphotransferase) domain 1 146 337 - -
Bisa05g0535 502 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 21 499 IPR045845 GO:0004672|GO:0009742
Bisa05g0535 502 FunFam probable serine/threonine-protein kinase At4g35230 394 502 - -
Bisa05g0535 502 SUPERFAMILY TPR-like 399 496 IPR011990 GO:0005515
Bisa05g0535 502 Pfam Protein kinase domain 80 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0535 Bisa-ChrBisa05 8739674 8744099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0535 21 347 Glycoside Hydrolase AT3G07070 33.898 8.06e-46 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bisa05g0535 Pkinase 1.1e-28 CL0016