Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0514 ATGGGAGATGGTGTTTTGACACCTGTTGCCATGCAGGAAGCGCCGCCTGAGTCCTCGATGGATTTCGACTATATGGATCAACTTTTCTTAGATGGTTGCTGGCTGGAGACCACGATAAATGGATCTGATTTCCCGCTAAATGCTCTCTCTACTTCGAGTCCTCTCTTTGACTCTTCATTTTCATGGCCTGCCTCGGACCCTAATGGCGGTTTGGGCGTAGTCCCATCTCACTATGTGAATCAACAAGGAAATGAATCCCAGGAAGCTCCTCTTAATACTCAGCCGATTGGCCAGGACATAATTACTCAGTCTGAATCTGAAAATCATTCGGTTGAAGCTTCTGAAGGGGTAAGAAGGTGGTGGATTGGACCCACTGCTAATCCAGGTCCTGCATCTTCTGTAATGGAGAGACTGATTAGGGCTCTTATGTATATCAAAGAGTTCAATGAAGATAAAGATGCACTCATACAAATATGGGTGCCGGTTAATAGAGAGGGTAGGAGGATTTTGACAACCACTGATCTCCCGTTCTCACTTGAAACTTGGTCTCCAAATCTTGCCAAGTACCGGGAAATCTCTGCGAAATATGAGTTTTCAGCTGAGGAGGAGTCCAAGGAGCTGGCGCCAGGATTGCCTGGTCGTGTTTATCTGGGGAAGCTTCCAGAGTGGACTCCTGATGTTCAATTTTTCACAAGTGATGAATACCCACGAGTAGACTATGCCCAAAGGTATCATGTACGTGGAAGTTTAGCCCTTCCAATCTTTGAGCAAGGTAGCAGGACTTGCTTGGGTGTTCTTGAGGTTGTCACGACTAACCAGCAGATCAAGTATCGTCGCCAACTTGAAAGCGTGTGCAAGGCATTAGAGGCTGTTGATCTTACGAGCTCCAAACTATCAAGTATGCAGAATGTGAAGGGATGGAACAAGTCTTATGAAACTGCCATACCCGAGATCCAAGAGGTGCTGAGATCCGCATGTGAAATGCACAAACTGCCTTTGGCTCAAACTTGGGTCCCATGCATCCAACAAGGCAAAGAGGGTTGCCGGCACTCGGATGATAATTATTTACACTGCATATCTCCTCTGGAGCAGGCTTGCTATGTTGGTGATGACCAAGTCCGGGGTTTTCTTGAGGCTTGCTCTGAGCATCACTTGTTAAAAGGTCAAGGCATCGCAGGTGAGGCTTTTCTGACCAACCAACCATGCTTCTCAACTGATGTAACTTCCTTGGGTAAGGCAAAGTATCCACTATCTCACCATGCAAGGATGTTTAAATTGAGGGCTGCTGTTGCTATCCGCCTGCGTAGCATCCATAATGCCAAAGACGACTTTGTCTTAGAGTTCTTCTTGCCCTTGTCTTGCGCTGACAGTAGTGAACAGAAAAAGATGCTTACTTCATTGTCCATGATCATACAAAGGGTTTGCAATAGCTTACGGGTCATAACAGATGAAGAGCTGGAGGAGGATAGTAATTTGTTAGTTGATAAGGTGATAGTTCCTGCAGATAATAGATCTGCTAGGAGTGGCAATGTTGCCTTATTGAACAGTGAAGAAAAATCAAGTGAAATTATGGGTAGAAAATCCTCTAACCTGAGGCTGCAACAAGAAGGGTATATTTTGAAAGGAAGCCTCGACTGTGCAGGGGAGTTTCCTACTGTTGGAGAGAGTAGCTTATCAAGTGTGGGTATAGGTAAAACAGGAGAGAAAAGACGAGCCAAAGCAGAGAAAACTATCACACTGGAAGTTCTTAGGCAACATTTTCCTGGAAGCCTAAAAGATGCTGCAAAGAATATTGGTGTTTGTACTACAACCTTGAAAAGGATCTGCCGGCAACATGGGATAAAGCGTTGGCCTTCTCGAAAGATAAAAAAGGTTGGTCACTCCTTACAAAAGCTTCAACTTGTTATAGACTCAGTTCAAGGTGCCTCTGGTGCTTTTGAAATAGATTCCTTCTATTCAGACTTCCCAAGATTAGCTTCTCCAAATTTGTTGGGAACCGGCCTGTTTTCAACTTGTAACCAAAGCAGCCAAAGTGATCGGGAAATCCCATCAAGCGCACTGCCTGAACTGAACTTGTTGAACACAGAAGCTGCTGCATCAAAATCACCCTCATCTTCATGCAGTCAGAGTTCCATTTCAAGCCATTCCCGTTCCAGCGAATCAGATCAACACCCTCTCACAAGAAATGTTGCCATTAGCAAAGATGTTAAAGCTGGAGAAGGTCCTGCTGATGGTGTGTTGAAGAGGGTCAGAAGTGAAGCAGAGCTAAAATGTTCAAGTCAAGATAGAGAAGAGCTTTTGACAAGATCCCAAAGCCAGGAAGCACTTGGCGATGACCCAAAAACTGAGCATTACTTGCCCTTATTGCAAAACAATCAGAGAGCACCTGAAAAGGAGGATGCTCACAGGGTGAAAATCACATACGGAGATGAGAAAGCCCGATTTCGGATGCCAAAGACATGGAGATATGATGATCTTCTGCAGGGAATAGCTAGGCGATTTAACATAATTGACATGAGCAAATATCATGTCAAGTATTTGGATGACGACTTGGAGTGGGTATTACTAACCTGTGATGCTGATCTGGAGGAGTGTATTGATGTTTATCAATCATCCGGGAGCAGTACAATCAAAATTTGCATCCGGTTGTCCAATCATTGTATGAGACGAAGCTGTGGTCCTTCATGA 2688 0.4468 MGDGVLTPVAMQEAPPESSMDFDYMDQLFLDGCWLETTINGSDFPLNALSTSSPLFDSSFSWPASDPNGGLGVVPSHYVNQQGNESQEAPLNTQPIGQDIITQSESENHSVEASEGVRRWWIGPTANPGPASSVMERLIRALMYIKEFNEDKDALIQIWVPVNREGRRILTTTDLPFSLETWSPNLAKYREISAKYEFSAEEESKELAPGLPGRVYLGKLPEWTPDVQFFTSDEYPRVDYAQRYHVRGSLALPIFEQGSRTCLGVLEVVTTNQQIKYRRQLESVCKALEAVDLTSSKLSSMQNVKGWNKSYETAIPEIQEVLRSACEMHKLPLAQTWVPCIQQGKEGCRHSDDNYLHCISPLEQACYVGDDQVRGFLEACSEHHLLKGQGIAGEAFLTNQPCFSTDVTSLGKAKYPLSHHARMFKLRAAVAIRLRSIHNAKDDFVLEFFLPLSCADSSEQKKMLTSLSMIIQRVCNSLRVITDEELEEDSNLLVDKVIVPADNRSARSGNVALLNSEEKSSEIMGRKSSNLRLQQEGYILKGSLDCAGEFPTVGESSLSSVGIGKTGEKRRAKAEKTITLEVLRQHFPGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGAFEIDSFYSDFPRLASPNLLGTGLFSTCNQSSQSDREIPSSALPELNLLNTEAAASKSPSSSCSQSSISSHSRSSESDQHPLTRNVAISKDVKAGEGPADGVLKRVRSEAELKCSSQDREELLTRSQSQEALGDDPKTEHYLPLLQNNQRAPEKEDAHRVKITYGDEKARFRMPKTWRYDDLLQGIARRFNIIDMSKYHVKYLDDDLEWVLLTCDADLEECIDVYQSSGSSTIKICIRLSNHCMRRSCGPS 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0514 895 Gene3D - 802 883 - -
Bisa05g0514 895 ProSiteProfiles RWP-RK domain profile. 564 645 IPR003035 -
Bisa05g0514 895 CDD PB1_NLP 802 882 IPR034891 -
Bisa05g0514 895 SMART PB1_new 801 884 IPR000270 GO:0005515
Bisa05g0514 895 MobiDBLite consensus disorder prediction 697 728 - -
Bisa05g0514 895 ProSiteProfiles PB1 domain profile. 801 884 IPR000270 GO:0005515
Bisa05g0514 895 MobiDBLite consensus disorder prediction 697 783 - -
Bisa05g0514 895 MobiDBLite consensus disorder prediction 741 769 - -
Bisa05g0514 895 PANTHER PROTEIN NLP8 91 892 IPR045012 GO:0003700
Bisa05g0514 895 Pfam RWP-RK domain 577 625 IPR003035 -
Bisa05g0514 895 Pfam PB1 domain 802 881 IPR000270 GO:0005515
Bisa05g0514 895 SUPERFAMILY CAD & PB1 domains 794 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0514 Bisa-ChrBisa05 8454896 8458399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0514 20 886 NLP Transcription Factor Family AT1G20640 49.773 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bisa05g0514 PB1 8.4e-17 CL0072