Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0512 ATGGGTATCTGTCTTCTGAAAGCAGTGGGTCAACCAAACACCTCTCCACCTTCATCCATGGACATGGACATGGATGCGGAAGGAAGAAGAAGCAAGAGGGAAGGGATCAGAGGGGAGATTGTGACACCCAATCTGAAGATTTTCAGTTTGGAAGAGCTCAAGAGTGCCACCAGAAACTTCAGACCCAACACAGTGTTGGGTGAGGGTGGATTTGGAAGGGTTTTCAAGGGATGGATCGATCAAAATACTTTAAAGCCCTCCAAAGTTGGCGTTGGAATTCCCGTTGCTGTCAAGAGATCTAACCCCGATAGCCTCCAAGGCTTAGAGGAATGGCAGAGCGAGGTGAAATTCTTGGGGAAGTTCAGTCATCCGAACCTGGTGAAGCTGATTGGCTACTGCTGGGAGGAGAATCAGTTCATCCTTGTTTACGAATACATGCAGAAGGGCAGCCTGGAAAACCACCTCTTCGGAAAAGGACCAGAACCACTAACGTGGGAGACGAGGCTAAAGATAGCGATAGGAGCAGCAAGAGGGCTGGCCTTCTTGCACACGTCTGAGAAGTCTGTGATTTACAGGGACTTCAAGTCCTCCAATATTTTGCTCGATGCGGATTACAATGCGAAGCTTTCAGATTTCGGGCTGGCGAAGTTTGGTCCCATCAACGGCAGATCCCACATCACCACTCGTGTCATGGGCACCTACGGTTACGCCGCGCCGGAGTACGTCGCCACCGGTCATCTGTATTTAAGAAGCGATGTGTACGGATTTGGGGTGGTGCTGCTGGAGATGTTAACGGGGATGCTTGCTCTGGATACAAACAGGCCCACTGGTGAACATAATTTGGTGGATGTCAAAAAACCATTTCTGGGCGACAAGAAGAAGCTCAAGAAGATTATGGACCCCAAGATGGCCCAACACTACTCCCTCACCGCCGCATTTCAAGTGGCCCAACTCATCCTCAAATGTTTAGAGCCTGATCCCAGGAAACGGCCTTCCATGGAAGACGTCTTGACCACCTTAGAGAAGGCCCATCGCATCACTCTTAAGCCCAAGCCCAGTAAGCCCAGCGCTGTCCATCAAAATTCTAAATCCACCTAA 1098 0.5009 MGICLLKAVGQPNTSPPSSMDMDMDAEGRRSKREGIRGEIVTPNLKIFSLEELKSATRNFRPNTVLGEGGFGRVFKGWIDQNTLKPSKVGVGIPVAVKRSNPDSLQGLEEWQSEVKFLGKFSHPNLVKLIGYCWEENQFILVYEYMQKGSLENHLFGKGPEPLTWETRLKIAIGAARGLAFLHTSEKSVIYRDFKSSNILLDADYNAKLSDFGLAKFGPINGRSHITTRVMGTYGYAAPEYVATGHLYLRSDVYGFGVVLLEMLTGMLALDTNRPTGEHNLVDVKKPFLGDKKKLKKIMDPKMAQHYSLTAAFQVAQLILKCLEPDPRKRPSMEDVLTTLEKAHRITLKPKPSKPSAVHQNSKST 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0512 365 Gene3D Phosphorylase Kinase; domain 1 32 145 - -
Bisa05g0512 365 ProSitePatterns Protein kinases ATP-binding region signature. 66 98 IPR017441 GO:0005524
Bisa05g0512 365 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 146 364 - -
Bisa05g0512 365 CDD STKc_IRAK 66 342 - -
Bisa05g0512 365 ProSiteProfiles Protein kinase domain profile. 60 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0512 365 PANTHER OS01G0588500 PROTEIN-RELATED 30 344 - -
Bisa05g0512 365 FunFam Serine/threonine-protein kinase BIK1 28 145 - -
Bisa05g0512 365 Gene3D Transferase(Phosphotransferase) domain 1 146 356 - -
Bisa05g0512 365 Pfam Protein tyrosine and serine/threonine kinase 64 339 IPR001245 GO:0004672|GO:0006468
Bisa05g0512 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Bisa05g0512 365 SUPERFAMILY Protein kinase-like (PK-like) 38 341 IPR011009 -
Bisa05g0512 365 MobiDBLite consensus disorder prediction 8 31 - -
Bisa05g0512 365 MobiDBLite consensus disorder prediction 344 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0512 Bisa-ChrBisa05 8362856 8366348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0512 41 340 Glycoside Hydrolase AT3G07070 47.541 2.28e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa05g0512 PK_Tyr_Ser-Thr 1.6e-45 CL0016