Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0508 ATGCAGTGCAAACGACACAGTGGTTTAGTTACAGATGGGCTTTCCTCATACCACTTTCCTTTCCCTGCCCTTCTCGTCTCTTTTTCCCTTCCAACAGCCCTAACACCGATTCCCCTTCCTGTTTCCGTCATGAAAGGTGCCAAGTCGAAGTCTGAATCAAAGAAACCCAATGCAAAGCTTGCCGTGAATAAGAAAGGTAGTGCCGCCACCAAGGCGGGCGGAAGATCGGCTAAGGGCAAGGCAGCGAAAGACCCTAACAAGCCGAAGAGACCACCTAGTGCCTTCTTCGTCTTCATGGAGGAATTTAGGAAGCAGTTCAACAAGGAACATCCTGAAAACAAAGCAGTATCTGCTGTTGGCAAAGCGGCTGGGGCAAAATGGAAGTCCATGTCTGATGCTGAGAAAGCACCATATGCAGCGAAGGCAGAGAAACGAAAGGCCGATTATGAGAAGAGTATGAAAGCGTATAACAAGAGACAGGCTGAAGGTCCCGATGCTGCGGACGAAGAAGAGTCAGAAAAGTCAATGTCTGAGGTGAATGATGAGGATGATGGAGATGAGGAGGGGAGTGGCGAGGAGGATGATGACGAGTAG 594 0.4949 MQCKRHSGLVTDGLSSYHFPFPALLVSFSLPTALTPIPLPVSVMKGAKSKSESKKPNAKLAVNKKGSAATKAGGRSAKGKAAKDPNKPKRPPSAFFVFMEEFRKQFNKEHPENKAVSAVGKAAGAKWKSMSDAEKAPYAAKAEKRKADYEKSMKAYNKRQAEGPDAADEEESEKSMSEVNDEDDGDEEGSGEEDDDE 197
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0508 197 Gene3D High mobility group box domain 73 157 IPR036910 -
Bisa05g0508 197 MobiDBLite consensus disorder prediction 47 94 - -
Bisa05g0508 197 MobiDBLite consensus disorder prediction 137 165 - -
Bisa05g0508 197 Coils Coil 139 159 - -
Bisa05g0508 197 SMART hmgende2 87 158 IPR009071 -
Bisa05g0508 197 SUPERFAMILY HMG-box 77 163 IPR036910 -
Bisa05g0508 197 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 44 193 IPR031061 -
Bisa05g0508 197 MobiDBLite consensus disorder prediction 166 197 - -
Bisa05g0508 197 Pfam HMG (high mobility group) box 88 157 IPR009071 -
Bisa05g0508 197 MobiDBLite consensus disorder prediction 108 197 - -
Bisa05g0508 197 CDD HMG-box_AtHMGB1-like 89 149 - -
Bisa05g0508 197 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 88 157 IPR009071 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa05g0508 Bisa-ChrBisa05 8276937 8278696 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bisa05g0508 HMG_box 2.2e-23 CL0114