Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0505 ATGTCTAAGCAAAAGATGGTCTCTGCAAAATTCGATAGCACTAAGAACCCTAAAAATGTGTACCACATCGGAGGCCTCCAAGTGGAATTTCCTTACCAGCCATACGGTTCTCAGTTTGCATTTATGGGTAGAGTCATCTCCACCCTTAACCAAGCTCAGAGAGAAGGCCATTGTCACGCATTGCTCGAGTCTCCAACCGGTACTGGCAAATCCCTTTCCCTCCTCTGTTCTTCTCTCGCTTGGCAGCAGAACTTTAAATCGAATAAACATAACACCAACCCCTCCCACCTGAAGCCCGATCCAGAGGCAACGACCGACCCTCTTGTCCACGGCGGTGGATTTGTTCCCGATGAGGTTTCTCCAACGTCAGAAAATTTGGAGCTGCCAGAGTCTGAGGCTAACAACAAGAAGCAGAAGAAAAAGGCTGCACCCACTATATATTATGCTTCGAGGACACATTCCCAAATTTCTCAAGTAATTCGTGAGTTGCGGAAAACTGCTTACAGGGTGCCTATGGCTGTGCTGGCATCACGGAAGCATTACTGTACCAATAAACATATCCTTTCCAAAGAGAATATTGATGAAGAATGCAAACTACTTATGAAAGATCAGGCAGTAGGATGTCCAGAATTCAAAAATGTACATAAAGTCAAAGGTCATCCGTCTCTTCAAAAAGGGGGATGCAATGAGGTGCATGATATCGAAGATCTTGTGAAAGTTGGACAAGCAGTGAAAGGTTGCTCCTATTATGCAGCTGTTTCTCTGACAGATGATGCACAGTTGGTATTTTGTCCATACAGCTATGTTATCAATCCAGTCATTCGTGCAGCAATGGATGTGAATATTAAAGGAGCCATTGTGATTCTTGATGAGGCCCACAATATAGAGGACATCACTCGCGATGCTGGTAGTATCGATATTGAAGAGGATGTTTTGTATAAGTTACAAATGGAGCTCCAGCAACTTTGTCCTGTCAACGCCCTGATATACCAACCTTTGTATGAAATGGCACAGGGTCTTACAAGTTGGATGGAACAAAGGAAAAATAAACTAGAAAAGCGTGATTTTCAGCACTACGTGTCTTGTTGGACTGGGGAAAAGGCTTTAAGAGAGCTTCAAGAAGCGAATATTTCACTACAGTGCTTCCCTATCTTGCTAGAATGTGCTACCAAGGCAATCAGAATTGCTACAGATTTGGAGTCAGATGTACCACATTTAAGTGGCATGGCAGTGATAACACTTGAAGGCTTATTCTCTTCACTAACTTATTTCTTCTCAAGAAATGGATCTCACATGTTGGATTACCAACTTGCTCTGCAGCGAAATGTTAAGAAAGATGCTGGAAGAGGCTTTGGAAACTGGACCCACACTTTAAGTTTGTGGTGCTTGAATCCATCAGTTGTGTTTAGCGACATTGCCAATCTTTCTTTGTCAGTCATTTTGACTTCTGGGACACTGTCACCAATGAATTCCTTTTCATCCGAGCTAGGAGTTCAGTTTGAAACTAGTCTAGAAGCTCCACATGTAATTGATGTTGACTCACAGGTGTGGCCTGCTGTAATCAGTACTGGTCCAGGTAATTATCCTTTGAATGCAAGTTATAAAACAGCGGATGGATATGCTTTCCAGGATGCAGTTGGAAGATCTTTAGAGGAAATCTTCAAGATTGTTCCTGGTGGCTGTCTTGTTTTCTTTCCAAGTTATAAATTGATGGAGAAATTATGCAATCGTTGGCATGAAACAGGTCTATGGTCTCGATTAAATGAAGAAAAGTCACTTTTTATTGAACCAAGAGGAGGAAACCAAGATGATTTTGAACTTGCTTTAAAAGGGTATTATGACTCAATTCGTTGTGGCAATAGACCTACTTTGGGCAAGAAAAGAAGGATTAAGAAGATTGGCTTTAATAGCCTCCATGCAGTTGATTCCCTAAAAAATTCTAGGAAAGGAGGAGCTGCTTTTCTTGGTGTTTGTCGAGGAAAGGTTTCTGAAGGAATTGATTTTTCTGACGATAATGCTAGAGTGGTTATTATAGTTGGAATTCCATTTCCCAACATAAATGATATTCAAGTATCACTAAAGAAGAAATATAATGACACATACAAATCATCCAAAAATCTTTTGAGTGGAAATCAGTGGTACTGCCATCAAGCATTCCGAGCTTTGAATCAAGCAGCAGGTCGTTGTATAAGGCATAAGCTTGATTATGGAGCAGTCATTTTATTGGATGAACGATTTCGGGAAGAAAGAAATAGAGCATTTATTTCAAAGTGGCTAAGAAAAACCTTAAGGATGTATGACAGTTTTGACATGTCTTTGGAGGGACTGAAATCATTCTTTGAGAAGGAAAAGGAGCAATTTGGCATGAAAGACACTCAAAATCTGGGCTTAAACTGGGAATATGACCAAACCAAGAATGAGAATAAGGGGTTCATAAGAAAGACAAATAAGAAATTGATCAAGTCTGATAATAGTGGTGAGATAGAAGTACCCCTGGTCAACCCCTTGCCAAGATCTCAAGATTGTGTTGAAAGTCAGCCATCGGAGCAAGAGAATTGTAGCTCATACGATTGTAAAGACTATTGTGACCCAGAAGGCTGCAATCAAGCAGAGCCAAGCTTCGCTGGGGATTTATCTGTGGCAGATACACATGAAGAAACCACCCTTGTCAAGGAAACCCCTTGTATAGATGGTGGCAGCAACCTGGCTAGTCCTGGTTACTGTTCTAAGGATGACTACTCTAATTCCACCATAATTGAGGCCTCTTTTGAATCACGTGATCAATTATCTATCCTTCCAATTTCTTTAACTAATGGAAATAAGGGTTCTTCAACAGCTCAGTCTTCAATATCAGTTACTCCTGAAAAAGATGTAACCGTGAACAACTGCCATATTGTGGAAATAGAATCATCTTTGAATAGGAGTGTTAATTCTCACACCCAGAAAAGGAGAAGGTCCATGAACATACCATTTATAAACCTTACTGAGGATGAAAATTATATTGCACCCTGTGCCAGCACTCCTACAAGGGACACTGTAAGGTCGGTGAATCTTAAAGAAGCTACTAATGGAAATGAATTTGATTCTCACAAAAGTTCTCAGTCAAATTTGCCTCAATTACAGACAAGCAATCTGACTGGGTCATATTTATTAACTGTTCCTCTCATGGAGAAAAGGTTACAGATATTTTGCTCACTTTGCAAGAACCCTTTGGGTCGACCCGAGAACCATCTATATATCACATGTTCTTTGACTTCATCATCGAAAGTTTACTTAGGATCTCTTTTGAAACATAGACTGAAAGCTTACACTGATGATACTTCAAGGAGTATACCAGTTATTATAACTGGCATTTCATATGTCAATCAACGTATCTGCAATAATGGAAGTGCTCCAGAGCAGGGTATTTGGTGCCAAGAAGATGGGTGCGTCTTCAGGACTATTTTCTGTCCCTTCTGCAGTAACCCGAAGAATTTGCTTGGAGTTCAGATCATGGCAACTAATGCATCGAATAGTCAGTTACTTGACAAGATATTGTTTTACTTTGATTTTTTGGAAGTTAAGGACCTGGAGGAATCAAGGAATGAGGCTGCAAAGGAAGTGGATTTGCATCTGGTTAGTGGCTCGGGTGTGGATGAGACTGCTGTCCTGAATTCCATTGACAAGTTTTCTTATCTTCCACAGCTAGAGAAGTCAAAAGTCTTGAAGACTAGAAAATCAAAGCTGGTGGAGGAGAACGTTGGATATGAGGTTGAGACAGATGTTACGGGTGAAGTAATAATGGCAAGAACGGTGAGGACTCAAGATTTGGGTAACGAGGCAACTAGTCATAGTAAACTTGATCGTGATTTAGAAAGAAAATGTCTGACCGTAGAAGCAGTTGTTACATTGGGACAAACAACTAACAATGCTTAA 3915 0.4059 MSKQKMVSAKFDSTKNPKNVYHIGGLQVEFPYQPYGSQFAFMGRVISTLNQAQREGHCHALLESPTGTGKSLSLLCSSLAWQQNFKSNKHNTNPSHLKPDPEATTDPLVHGGGFVPDEVSPTSENLELPESEANNKKQKKKAAPTIYYASRTHSQISQVIRELRKTAYRVPMAVLASRKHYCTNKHILSKENIDEECKLLMKDQAVGCPEFKNVHKVKGHPSLQKGGCNEVHDIEDLVKVGQAVKGCSYYAAVSLTDDAQLVFCPYSYVINPVIRAAMDVNIKGAIVILDEAHNIEDITRDAGSIDIEEDVLYKLQMELQQLCPVNALIYQPLYEMAQGLTSWMEQRKNKLEKRDFQHYVSCWTGEKALRELQEANISLQCFPILLECATKAIRIATDLESDVPHLSGMAVITLEGLFSSLTYFFSRNGSHMLDYQLALQRNVKKDAGRGFGNWTHTLSLWCLNPSVVFSDIANLSLSVILTSGTLSPMNSFSSELGVQFETSLEAPHVIDVDSQVWPAVISTGPGNYPLNASYKTADGYAFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWHETGLWSRLNEEKSLFIEPRGGNQDDFELALKGYYDSIRCGNRPTLGKKRRIKKIGFNSLHAVDSLKNSRKGGAAFLGVCRGKVSEGIDFSDDNARVVIIVGIPFPNINDIQVSLKKKYNDTYKSSKNLLSGNQWYCHQAFRALNQAAGRCIRHKLDYGAVILLDERFREERNRAFISKWLRKTLRMYDSFDMSLEGLKSFFEKEKEQFGMKDTQNLGLNWEYDQTKNENKGFIRKTNKKLIKSDNSGEIEVPLVNPLPRSQDCVESQPSEQENCSSYDCKDYCDPEGCNQAEPSFAGDLSVADTHEETTLVKETPCIDGGSNLASPGYCSKDDYSNSTIIEASFESRDQLSILPISLTNGNKGSSTAQSSISVTPEKDVTVNNCHIVEIESSLNRSVNSHTQKRRRSMNIPFINLTEDENYIAPCASTPTRDTVRSVNLKEATNGNEFDSHKSSQSNLPQLQTSNLTGSYLLTVPLMEKRLQIFCSLCKNPLGRPENHLYITCSLTSSSKVYLGSLLKHRLKAYTDDTSRSIPVIITGISYVNQRICNNGSAPEQGIWCQEDGCVFRTIFCPFCSNPKNLLGVQIMATNASNSQLLDKILFYFDFLEVKDLEESRNEAAKEVDLHLVSGSGVDETAVLNSIDKFSYLPQLEKSKVLKTRKSKLVEENVGYEVETDVTGEVIMARTVRTQDLGNEATSHSKLDRDLERKCLTVEAVVTLGQTTNNA 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0505 1304 SMART Cxpdneu3 568 748 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Bisa05g0505 1304 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 23 782 IPR045028 -
Bisa05g0505 1304 FunFam Fanconi anemia group J protein homolog 527 774 - -
Bisa05g0505 1304 Gene3D - 527 773 IPR027417 -
Bisa05g0505 1304 Pfam Helicase C-terminal domain 550 761 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Bisa05g0505 1304 Gene3D - 34 341 IPR027417 -
Bisa05g0505 1304 Pfam DEAD_2 148 311 IPR010614 GO:0003677|GO:0003678|GO:0005524
Bisa05g0505 1304 CDD SF2_C_XPD 514 746 - -
Bisa05g0505 1304 MobiDBLite consensus disorder prediction 87 140 - -
Bisa05g0505 1304 SMART deadxpd 26 327 IPR006554 GO:0003678|GO:0016818
Bisa05g0505 1304 FunFam Fanconi anemia group J protein-like isoform E 134 344 - -
Bisa05g0505 1304 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 24 362 IPR014013 GO:0005524
Bisa05g0505 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 742 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0505 Bisa-ChrBisa05 8196479 8209786 Dispersed