Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0495 ATGACTTCCCCCTCGAGATTCCTGAGCGAGCGAGACTCCTCCGGCGACGACTCACCACCCAACTCCTTCTCCCACCACTCCGACCTCCTCGTTATCCTCGCCGCTCTCGTCTGTGCTCTTATCTGCGTTTTAGGCCTCATCGCCGTCGCCCGCTGCCCCTGCCTCCGCCGCCTCGCCACCTCGTCCTCTCCTCCTCCGCCTGCTCCTCGCGCCAATAAAGGCATCAAAAAGAAGAATCTCCGCTCTCTTCCAAAGCTCACCGTCGCTCCGGAATCAGCAGCCGCGTACTCCGATTGCGCGATCTGCCTCGCTGAATTCATCGGCGGCGACGAAATCCGAGTACTGCCTCAGTGCGGCCATGGCTTCCATGTGTCCTGCATCGATAGGTGGCTTGAATCGCACTCATCCTGCCCATCCTGCCGTCAGATTCTGGTGGTCAGTAGGTGCCACAAGTGTGGTGGCTTCCCCGGGAGCTCCAGCGCGGGAGCTGAATCGGAGGCCAGAATGAAGCAGGGAGAGGACGATGTGAATAGGTTTCTACCATAA 546 0.5971 MTSPSRFLSERDSSGDDSPPNSFSHHSDLLVILAALVCALICVLGLIAVARCPCLRRLATSSSPPPPAPRANKGIKKKNLRSLPKLTVAPESAAAYSDCAICLAEFIGGDEIRVLPQCGHGFHVSCIDRWLESHSSCPSCRQILVVSRCHKCGGFPGSSSAGAESEARMKQGEDDVNRFLP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0495 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 145 IPR013083 -
Bisa05g0495 181 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 23 153 - -
Bisa05g0495 181 CDD RING-H2_EL5-like 98 141 - -
Bisa05g0495 181 SMART ring_2 99 140 IPR001841 -
Bisa05g0495 181 MobiDBLite consensus disorder prediction 1 20 - -
Bisa05g0495 181 SUPERFAMILY RING/U-box 80 147 - -
Bisa05g0495 181 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Bisa05g0495 181 Pfam Ring finger domain 98 141 IPR001841 -
Bisa05g0495 181 MobiDBLite consensus disorder prediction 167 181 - -
Bisa05g0495 181 MobiDBLite consensus disorder prediction 158 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0495 Bisa-ChrBisa05 8039455 8040000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0495 6 181 C3H Transcription Factor Family AT1G20823 63.351 1.91e-68 205