Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0482 ATGGAAAAAGTTGCTACACAAGTGGCAGCTCCCATTTTCATACACCAATCTCTTTCTAGTCGATTTTGTGAATCACCTGCAATTGCAAAGAAGCGTGATCTGTCCTATGTAGCCTCCCCCAACTTCCTTCACCAACAGTTACAAAACCCTAGCGACAACTGGAACCCAAAGGGATGGGAGTGGGACACTGTCAGATTCGTTGCCAAACCCTTGGACACTGACATGCTGCAATTGGGGACTCCCACGACCACGGCAAAAGACGAACGCCTTCTAGCTGTTTCCGATTTCAACAAGAGCTCCGTTGTCAATGATGATGAACAAGAAGAAAGCCTTCGTTTGAATCTCGGCGGTCGCTTGGCCTCCAATACGGTGCAGGAGCCCATGTCACGCCCGAACAAAAGGCTACGTTCTGGCTCACCTGGCGGAGGCGGACCCTCTTATCCTATGTGTCAGGTCGATAACTGTAAGGAAGATCTCTCCAATGCCAAAGACTATCACCGCCGACACAAAGTTTGTGAGCTTCACAGCAAATCTTCCAAAGCCCTTGTCTCTAAGCAAATGCAACGATTCTGCCAGCAGTGTAGCAGATTTCACCCTCTGTCGGAGTTTGATGAAGGAAAGAGAAGTTGTAGACGTAGACTTGCTGGGCATAACCGTCGAAGGAGAAAAACTCAACCAGAAGATGTTACCTCGCGGCTGCTCCCGGGAAACCAGGATAATGGAACATCTAACAATTTGGATATTGTTGACTTGTTGACTACAATAGCTTGTGCGCAAGGGAAATTTGGGGGAAGAAGTAAAATCTGTTCACAACTTCCACAGAGAGACCAGCTTGTTCAGATTCTTAGTAGGATAAATTCATTACCATTGCCAGCTGACCTTGCTGCAAAGTTGGCTAATGTTGAAAATTTGTGTGTGAATGTTCCTGGGCAAAGTTCGTCAGATAATCATGATAAATTTAACCAGAACAAGTCTTCCCCATCAACTATGGACTTGCTTGCTGTTCTTTCAGCCACTCTATCAGCATCTGCTCCTGATGCCATTGCTTTACTCTCCCAGAAATGCAGCCACAGTAGTGACAGTGAGAAATCTAGGTCAAGTGGTGCTGACCAAACAACTGAGCCAAGTCCACAGACAAGACAACCCCTGGAATTCGCTTCAATTGGAACAGAAAGAAGTAGTGGCAGTTTCCAGTCTCCTGTTGAAGATTTTGATTGCCAGGGTCAAGAGACTCAAATTAATTTACCACTGCAGCTTTTTAGCTCCTCTCCAGAAGATGAAAGGCTGCCAAAAATGCCATCGTCACGAAAGTATATCTCATCTGACAGTAGTAATCCTGTTGAAGAGACATCACCCTTATCTTCTCCTTCTTTGGTACAAAAGCAGTTTGCCTTGCAGAGTGTAACTGAAGGTATCAAGTCAGACAAAATTTCAACTGGAAGGGTGGTCAATGCACACAAGGAAGTCAGCCAAAGTGATGGATGTAATATTTCCCTTGATCTTTTTAGAGGGTCAAATAGTAGAGTCCAACCTAGTTCACTGCAGAGTGTTCCACTTCAAGCTGGGTACACATCTTCAGGATCTGATCATTCACCGCCAAGTTTGAATTCAGATGCTCAGGATCGTACTGGTCGAATAATGTTTAAACTATTTGACAAGGATCCTAGTCATTTGCCAGGGACACTGCGAACTCAGATTTACGATTGGCTTTCTAATAGCCCATCAGAGATGGAGAGCTACATAAGGCCTGGCTGTGTGATCCTATCAGTCTATGTTTCAATGTCTTCTGCTGCCTGGGAGCACTTCGAAGAAAATTTTCTTCTATATGTACGTTATTTAATTCAAAATTATGATTCTAAGTTTTGGAGAAATGGGAGGTTTCTAGTTCATGCTGGCAGTCAGTTAGCATCACATAAAGATGGAAAGATTCGCTTATGCAAAACATGGAGAACATGGAGGTCACCAGAGTTGATATCTGTCTCCCCTCTGGCAATTGTTGGGGGACAAGAAACCTCAATTTCATTGAAGGGTAGAAATCTTTCAACACCTGGCACCAAGATTCACTGCACAAACATGAGTTGTTCAACGTCAAAGGAAGTTATAGGGTCTGTTTATTCTGGTATGACATATGATGAGATAAAATTGGGTGGATTTAAAGTTGACAATGAATCTCCTGGTGTTCTTGGTCGATGTTTCATTGAGGTTGAGAATGGTTTCAAGGGTAACAGTTTTCCGGTGATAATAGCTGATGCGACCATTTGTAAGGAATTGCAATTACTTGAGTCTGAGTTAGACGTGGAGGTGAGGTTACCTGATGCCATGGCAGAAGAGCATGCTTATGATTTTGCAAGGATCAGGTCTTCGAGGGAGGAGGTTTTGCGCTTTCTGAATGATCTTGGCTGGCTTTTCCAAAGAAAAAGGTCCTCATGTGCACATGAGGTTCCAGATTATTCACTTGACAGGTTCAAATTTTTGCTCATATTCTCTGTGGAAAGAAACTGTTCAATGTTGGTCAAAACCCTTATGGATATGCTGGTTGAGCAACACATGGAAGGGGAATGGTTGTCTGAGGGCTCAGTGGCGATGCTGAATGCAATTCAACTCTTGAACCAGGCTGTAAAAAGAAGGTATATAGAAATGGTTGACTTGCTCATCTGCTATTCTATACCTAGCCAAAATGGTTCATCCAGGAAATATGTATTTCTGCCAAATCTTGAGGGACCTGCTGGTATTACTCCCTTACATTTGGCTGCTTGCACATCTGGTTCTGAGGGTGTAATTGACTCTCTGACAAATGATCCACAAGAGATTGGATTGAAGTGCTGGGAGTCTCTTGTGGATGCAAGTGGACAGACCCCGTATACCTATGCCATGATGAGAAATAATCACTCTTATAACAAGCTGATTGCTCGTAAACTTGCTGATAGAGAAAAAGGTCAAGTTTCAGTGATAATTGAAGACGAAACACAGCAACCATCGCTGGAAATTGAGCATAAACCATGGCCAAGTAACAAAGTTGAACGAAGTCAGGGATCTTGTGCCAAGTGTGTGGTTGCAGCAATGCACTATAACAGGAGAGCTCTGGGTCCACCAGGGCTGCTTCACCGTCCCTACATTCATTCAGTGCTTGCTATTGCTGCTGTATGTGTATGTGTTTGTCTATTCTTCCGTGGAGCCCCTGATATCGGCTCGGTTGCTCCCTTCAAGTGGGAAAATTTGGATTATGGCACAAGTTAG 3237 0.4393 MEKVATQVAAPIFIHQSLSSRFCESPAIAKKRDLSYVASPNFLHQQLQNPSDNWNPKGWEWDTVRFVAKPLDTDMLQLGTPTTTAKDERLLAVSDFNKSSVVNDDEQEESLRLNLGGRLASNTVQEPMSRPNKRLRSGSPGGGGPSYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSSKALVSKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDVTSRLLPGNQDNGTSNNLDIVDLLTTIACAQGKFGGRSKICSQLPQRDQLVQILSRINSLPLPADLAAKLANVENLCVNVPGQSSSDNHDKFNQNKSSPSTMDLLAVLSATLSASAPDAIALLSQKCSHSSDSEKSRSSGADQTTEPSPQTRQPLEFASIGTERSSGSFQSPVEDFDCQGQETQINLPLQLFSSSPEDERLPKMPSSRKYISSDSSNPVEETSPLSSPSLVQKQFALQSVTEGIKSDKISTGRVVNAHKEVSQSDGCNISLDLFRGSNSRVQPSSLQSVPLQAGYTSSGSDHSPPSLNSDAQDRTGRIMFKLFDKDPSHLPGTLRTQIYDWLSNSPSEMESYIRPGCVILSVYVSMSSAAWEHFEENFLLYVRYLIQNYDSKFWRNGRFLVHAGSQLASHKDGKIRLCKTWRTWRSPELISVSPLAIVGGQETSISLKGRNLSTPGTKIHCTNMSCSTSKEVIGSVYSGMTYDEIKLGGFKVDNESPGVLGRCFIEVENGFKGNSFPVIIADATICKELQLLESELDVEVRLPDAMAEEHAYDFARIRSSREEVLRFLNDLGWLFQRKRSSCAHEVPDYSLDRFKFLLIFSVERNCSMLVKTLMDMLVEQHMEGEWLSEGSVAMLNAIQLLNQAVKRRYIEMVDLLICYSIPSQNGSSRKYVFLPNLEGPAGITPLHLAACTSGSEGVIDSLTNDPQEIGLKCWESLVDASGQTPYTYAMMRNNHSYNKLIARKLADREKGQVSVIIEDETQQPSLEIEHKPWPSNKVERSQGSCAKCVVAAMHYNRRALGPPGLLHRPYIHSVLAIAAVCVCVCLFFRGAPDIGSVAPFKWENLDYGTS 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0482 1078 FunFam Squamosa promoter-binding-like protein 14 142 211 - -
Bisa05g0482 1078 Gene3D - 141 211 IPR036893 GO:0003677|GO:0005634
Bisa05g0482 1078 MobiDBLite consensus disorder prediction 508 539 - -
Bisa05g0482 1078 Pfam SBP domain 150 223 IPR004333 GO:0003677
Bisa05g0482 1078 MobiDBLite consensus disorder prediction 436 457 - -
Bisa05g0482 1078 MobiDBLite consensus disorder prediction 355 383 - -
Bisa05g0482 1078 Gene3D - 825 996 IPR036770 -
Bisa05g0482 1078 MobiDBLite consensus disorder prediction 214 241 - -
Bisa05g0482 1078 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 99 896 IPR044817 GO:0003677
Bisa05g0482 1078 MobiDBLite consensus disorder prediction 415 457 - -
Bisa05g0482 1078 MobiDBLite consensus disorder prediction 120 146 - -
Bisa05g0482 1078 SUPERFAMILY SBT domain 148 228 IPR036893 GO:0003677|GO:0005634
Bisa05g0482 1078 ProSiteProfiles Zinc finger SBP-type profile. 147 224 IPR004333 GO:0003677
Bisa05g0482 1078 SUPERFAMILY Ankyrin repeat 863 975 IPR036770 -
Bisa05g0482 1078 MobiDBLite consensus disorder prediction 365 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0482 Bisa-ChrBisa05 7820033 7824966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0482 1 1077 SBP-box Gene Family AT1G20980 53.444 0.0 1028
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa05g0482 SBP 3e-29 No_clan