Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0473 ATGGGTGCGGCTACCACCTGCTATCCGCCGCCGCGCGCCGATGAGATGGCCGTCTGGCCTCTGAATTCTCTGCCTCTGGGGTTCAGATTCCGGCCCACAGACGAGGAGCTTATTGATTTCTACCTGCGACAGAAGATTAACGGTAATGGTGACGAAGTTTGGGTTATTCGGGAAATCGATGTTTGCAGATGGGAGCCCCGGGATTTGCCTGATTTATCGGTGATACGCAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCACAGGACCGCAAGTATCCAAATGGGCATCGGTTGAACCGAGCAACAAACAAGGGGTATTGGAAGGCAACGGGGAAGGATCGCAAAATAAAGTCCGGGTCCAATTTAATAGGTATGAAGAAGACTTTAGTGTTCTATAGTGGTCGTGCGCCCAAGGGGAAGAGGACTTATTGGGTTATGCATGAATACCGTACTACCCTAAAGGAGCTTGATGGTACAAATCCTGGACAGAATCCCTATGTCCTTTGTCGATTGTTTAAGAAAAAAGATGAGAGTCTTGAAGAAGCAGAGCGGACTGCGTCAACTCCTACCACTGCTAATTACTCTCCTGAAGAAACACGATCTGATGCAGGTTTGGCTGCAGTATCCCCGTCACTGGCTACGGAAGATGATAAGCGTGGCATAGATCCATTTTGTATCTCTGAGAACACTGAAGAAGCAACATCTAATGTTATAGCGCCAGCTCATTGCCACAGTGATGGGTGTGATGCTTATGATGCACAAAATAACATTGTAAAAACAACAGATGCAAAGGAGGATTCACTGCTGAATCTCGACATATTTAATGAACTGATAACTGAGCCCTTTGATGACACACTGTTTTCCCCATTACGTGTGTCATTTTATCATCCAGCGAGCAATGAATCAGATGCTCATTGTGGGCTGCAGTTTCAGTATGGTTCAAATGAGACAAATATTTCAGAGTTATTTGACTCAGTTAATTGGGGTGAGATATCTGGTGAGGGTTCCATCAGTCAAAAACCAACCTCTACCATTTTAAATCCTAGGGACAATGGATCAGGCAGTGACTCGGATGTTGAAATGGCCAACATACTGCCTCTGCAAGCGTTGCGTGCTGCGAATCCTGAGGAGATTAACGACGGGAGGGCTCCTTCCATGATCCAGACAACTACAGAATTTCAAAGTGCCATCACCTCTGATGTTGGTGGTTACGAGCAGAAGAACAATATGGGGTTATTCCAAAACAATACTCAGATGGCTTTGTCATGCAGTGTTGCTTTTGACCAAGTGTATAATGTATTCAATGGTACTCAGGAATCAAGGAACTATAATGCAGCTTTTAGCGGTGATAGTAGTACTGGAATCAGGCCTAGGACTCGCCAAGTGCGAATTGAACAGCTGAACATGAACCCTGAGATCCAGGGTACTGCACCAAGAAGAATACGTCTGCAATTACATGAATCTCAACTTAGCTCCAATAAAACGGCAAAAGATGGGAGTTGTGCACAAGAAGACAGTGATTCAAAGCCAATTACCATAGGCACAGGGGAGAGTAAAGCTTCAGGAAATCATGCTGCTAATGAGGAAGTTATTGATACTAAGGCCAAGAATAAACCTCAGAATTCTGTGTCAAATGATAGTTGTAAGATTTCTCAACTTGGTACAAATACAGGTTCTGTCTCATGGTTAAAATCGACTTCACGGCACAAATCGGTCCGGCAGACACCAAAGGCTTCTTATCGTCACCCACTTTGGTCAATAATCTTGGTATTCTCTGTCAGTTTACTGGTCATAGTAGTATTCTTAGCTAACATATCGGGATTGAGGAGTTATTGA 1836 0.4461 MGAATTCYPPPRADEMAVWPLNSLPLGFRFRPTDEELIDFYLRQKINGNGDEVWVIREIDVCRWEPRDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNKGYWKATGKDRKIKSGSNLIGMKKTLVFYSGRAPKGKRTYWVMHEYRTTLKELDGTNPGQNPYVLCRLFKKKDESLEEAERTASTPTTANYSPEETRSDAGLAAVSPSLATEDDKRGIDPFCISENTEEATSNVIAPAHCHSDGCDAYDAQNNIVKTTDAKEDSLLNLDIFNELITEPFDDTLFSPLRVSFYHPASNESDAHCGLQFQYGSNETNISELFDSVNWGEISGEGSISQKPTSTILNPRDNGSGSDSDVEMANILPLQALRAANPEEINDGRAPSMIQTTTEFQSAITSDVGGYEQKNNMGLFQNNTQMALSCSVAFDQVYNVFNGTQESRNYNAAFSGDSSTGIRPRTRQVRIEQLNMNPEIQGTAPRRIRLQLHESQLSSNKTAKDGSCAQEDSDSKPITIGTGESKASGNHAANEEVIDTKAKNKPQNSVSNDSCKISQLGTNTGSVSWLKSTSRHKSVRQTPKASYRHPLWSIILVFSVSLLVIVVFLANISGLRSY 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0473 611 MobiDBLite consensus disorder prediction 184 198 - -
Bisa05g0473 611 Pfam No apical meristem (NAM) protein 25 150 IPR003441 GO:0003677|GO:0006355
Bisa05g0473 611 MobiDBLite consensus disorder prediction 487 526 - -
Bisa05g0473 611 Gene3D NAC domain 33 179 IPR036093 GO:0003677|GO:0006355
Bisa05g0473 611 MobiDBLite consensus disorder prediction 334 357 - -
Bisa05g0473 611 FunFam Nac domain-containing protein 86 33 177 - -
Bisa05g0473 611 SUPERFAMILY NAC domain 16 174 IPR036093 GO:0003677|GO:0006355
Bisa05g0473 611 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 246 - -
Bisa05g0473 611 MobiDBLite consensus disorder prediction 487 522 - -
Bisa05g0473 611 ProSiteProfiles NAC domain profile. 24 174 IPR003441 GO:0003677|GO:0006355
Bisa05g0473 611 MobiDBLite consensus disorder prediction 179 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0473 Bisa-ChrBisa05 7674405 7677322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0473 16 486 NAC Transcription Factor Family AT4G35580 42.062 2.19e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa05g0473 NAM 1.3e-33 No_clan