Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0450 ATGTCGCAGCAAAGGCAAAATAGGATGATGTTGAGTCCAAACAATGCCAGACAAGTTGGCGACACAACCTATACAAAGATCTTCGTGGGAGGGTTGGCTTGGGAGACCAAACGGGACTCTCTGAAACGCTATTTTGAGCAGTTTGGTGAGATCTTAGAGGCTGTGGTTATCACTGACAGAAACACTGGAAGATCCAAAGGCTATGGCTTTGTCACTTTCAAGGAGCCAGACTCTGCAATAAGAGCCTGTCAAGATCCCTACCCTTTCATCGATGGAAGGAGGGCTAATTGTAATCTTGCAGCTCTTGGTTCCCAGAAACTCAACCCTTCTTCCCCAGTTGCAGGAGGTGCGAAATTCAGCACAAGTTCATGGACTATGGTACCAATCCCATTCCAAGGCACCTCCTCGTATTACAATCAACACATTCCTCACTACACTTTTCCTTATCAACCCTATAGGTATCCTGCTTATCCTCCCCCACAAGAAATCTATCCAATGAACTACCATGGTGTTTATAGAGGGCAGCAGCTTCCAATTCGGTTTCGTCCTGCGATTTACCAACCCTTTTATGGGTTGAGTCATTACATGGGACCACCACCTCAAGAATATGGGAAGAAGACACAACATCCTGATTTGTCTCCCCAGCAAATGTTCACTGTTGTTGGCTTGCCAGAACCTATTTCTGTGTCTCCTTCAATACCCACCACTGGAGTAGTGACAGCAACAGAAGCTGCTGCTGCAGCAGCAAAGATAGGATCCTCCCCTGAACACAAATCAACTTCAGCTTAG 789 0.4639 MSQQRQNRMMLSPNNARQVGDTTYTKIFVGGLAWETKRDSLKRYFEQFGEILEAVVITDRNTGRSKGYGFVTFKEPDSAIRACQDPYPFIDGRRANCNLAALGSQKLNPSSPVAGGAKFSTSSWTMVPIPFQGTSSYYNQHIPHYTFPYQPYRYPAYPPPQEIYPMNYHGVYRGQQLPIRFRPAIYQPFYGLSHYMGPPPQEYGKKTQHPDLSPQQMFTVVGLPEPISVSPSIPTTGVVTATEAAAAAAKIGSSPEHKSTSA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0450 262 Gene3D - 1 116 IPR012677 -
Bisa05g0450 262 SMART rrm1_1 26 98 IPR000504 GO:0003723
Bisa05g0450 262 CDD RRM_RBM24_RBM38_like 25 100 - -
Bisa05g0450 262 PANTHER BOULE-RELATED 14 225 - -
Bisa05g0450 262 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 84 IPR000504 GO:0003723
Bisa05g0450 262 SUPERFAMILY RNA-binding domain, RBD 10 101 IPR035979 GO:0003676
Bisa05g0450 262 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 102 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0450 Bisa-ChrBisa05 7388960 7390225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0450 21 159 C2H2 Transcription Factor Family AT2G19380 31.646 6.75e-16 75.1