Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0424 ATGATGGGGGGTGATGATGTTGATGAGAATATTCAAGCATCAGAAGAAAGCTTCACCTGTTCAGAGGCATCTCAGAATCCAAGGAAGAAAAACAAGGTGGAGAACAAGAGGAGGTTCAGTGATGAACAAATCAGATCACTGGAGTGCATATTTGAGTCAGAGTCAAAGCTGGAGCCAAGGAAGAAGATTCAAGTAGCAAGAGATCTTGGGCTGCATCCTCGCCAAGTTGCTATATGGTTCCAGAACAGAAGAGCCAGAGGGAAATCAAAATGGATAGAGCAAGAATACACGAAGCTCAGAGATGAGTATGACAATCTAGCTTCCAGGTTTGAGTCCCTAAAGAAAGAGAAAGAGTCCTTGCAGATTGAGTTGCAGAAGCTACATGATCTAATGGAGGCATCTCCTGATGGTCAAATGGAAAATAGAACAGAATGGAGGGGTGAAGTGAAGCCAAGTGTCTCAGATGAGGAGGGTTTGGAGGACAGAGAAGGCATGCATTTACAACATCAAAATGAAATGAGCAAGAACACTGGGTATTCTGAGGACACTGGATACCAGCTTCTGAGAATGGATGAGCATGAAGAAGTTCCTTTGGGATCACTTGAGAAATGGTACAGTGGGGATGCAAGTGGTCTCTTAGATCAACCTTGCAGTAGTTCACATTGGCTAGATTTCTGGACTTGA 684 0.4386 MMGGDDVDENIQASEESFTCSEASQNPRKKNKVENKRRFSDEQIRSLECIFESESKLEPRKKIQVARDLGLHPRQVAIWFQNRRARGKSKWIEQEYTKLRDEYDNLASRFESLKKEKESLQIELQKLHDLMEASPDGQMENRTEWRGEVKPSVSDEEGLEDREGMHLQHQNEMSKNTGYSEDTGYQLLRMDEHEEVPLGSLEKWYSGDASGLLDQPCSSSHWLDFWT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0424 227 MobiDBLite consensus disorder prediction 1 37 - -
Bisa05g0424 227 Coils Coil 96 130 - -
Bisa05g0424 227 Pfam Homeodomain 36 88 IPR001356 GO:0003677
Bisa05g0424 227 Gene3D - 32 95 - -
Bisa05g0424 227 ProSitePatterns 'Homeobox' domain signature. 65 88 IPR017970 GO:0000981|GO:0006355
Bisa05g0424 227 PRINTS Lambda-repressor HTH signature 70 86 IPR000047 GO:0003677
Bisa05g0424 227 PRINTS Lambda-repressor HTH signature 61 70 IPR000047 GO:0003677
Bisa05g0424 227 Pfam Homeobox associated leucine zipper 91 131 IPR003106 GO:0006355|GO:0043565
Bisa05g0424 227 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 26 174 IPR045224 GO:0003700
Bisa05g0424 227 MobiDBLite consensus disorder prediction 136 157 - -
Bisa05g0424 227 ProSiteProfiles 'Homeobox' domain profile. 30 90 IPR001356 GO:0003677
Bisa05g0424 227 SMART HOX_1 33 94 IPR001356 GO:0003677
Bisa05g0424 227 FunFam Homeobox-leucine zipper protein ATHB-7 8 90 - -
Bisa05g0424 227 CDD homeodomain 36 91 IPR001356 GO:0003677
Bisa05g0424 227 SUPERFAMILY Homeodomain-like 20 89 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0424 Bisa-ChrBisa05 6972562 6973325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0424 1 227 Homeobox Transcription Factor Family AT2G46680 39.313 4.13e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa05g0424 Homeodomain 1e-15 CL0123