Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0412 ATGGCGGGGTCGGAGACGAAGTTCCTGCAGGAGTTGGCTTTGTACGCAGCGAGCGCCGCTTTGAGCTGCTTGGTCTTGTTCGCCGGGCTCCGTCACCTCGACCCGAACCGTGAGACATCGAAGAAGGCTCTTGAGCACAAGAAAGAGATAGCCAAGCGTTTAGGTCGTCCTCTCATTCAGACAAACCCTTACGAGGATGTTATAGCCTGTGATGTTATAAATCCTGACCACATCGACGTGGAGTTTGACTCCATTGGGGGACTGGAAAGGATCAAGCAGGCTTTGTGTGAGCTTGTTATACTGCCTCTAAAAAGACCAGACCTTTTTTCTCATGGCAAGCTTCTTGGGCCACAAAAAGGGGTACTGTTGTATGGACCACCTGGAACTGGGAAAACTATGCTTGCCAAAGCTATTGCGAAGGAGTCTGGAGCAGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTTGGTGATGCCCAAAAGCTTGTGGCGGCTGTATTTAGCCTGGCTTATAAGCTCCAGCCTGCCATTATATTCATTGATGAAGTAGACAGTTTTTTAGGCCAGCGTCGTACAACAGATCATGAGGCGTTATTAAACATGAAAACTGAGTTCATGGCGTTGTGGGATGGATTTACCACAGACCAGAATGCTAGAGTTATGGTCCTCGCAGCTACTAATCGTCCTTCAGAACTTGATGAAGCAATTCTTCGACGTCTTCCGCAAGCCTTTGAAATTGGGGTTCCAGATCGAAGGGAGAGGGTGGAGATATTGAAGGTTATATTGAAGGGTGAGAATGTTGAGGACAACATTGACTTTGATCATATAGCTGGCTTGTGCGAGGGTTATACAGGTTCGGATTTATTTGAACTCTGCAAGAAGGCTGCCTATTTTCCTATTAGGGAGCTACTGGACGAAGAGAAGAAAGGAAAACAGTTTCCTGCACCAAGGTCAATGTCACAGTCAGATTTGGAGAAGGTCCTTGCCACTTCAAGGAAAACGAAGGTTGCTGCAGGCGAATACAGTGGATTAGGCCTACAGTCACCAAGATGGACAGGGCACAGGGAAGGTGATTATCAGTTTCAAGATGCAATCAATGAATTCTCTAAGCTTTTGGTTTCCCAAATTATTAACCTCCAATCAGATGCTCAGGATCCTTAA 1170 0.4624 MAGSETKFLQELALYAASAALSCLVLFAGLRHLDPNRETSKKALEHKKEIAKRLGRPLIQTNPYEDVIACDVINPDHIDVEFDSIGGLERIKQALCELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGVPDRRERVEILKVILKGENVEDNIDFDHIAGLCEGYTGSDLFELCKKAAYFPIRELLDEEKKGKQFPAPRSMSQSDLEKVLATSRKTKVAAGEYSGLGLQSPRWTGHREGDYQFQDAINEFSKLLVSQIINLQSDAQDP 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0412 389 SMART AAA_5 117 253 IPR003593 GO:0016887
Bisa05g0412 389 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 42 342 - -
Bisa05g0412 389 FunFam ATPase family AAA domain-containing protein 1 79 256 - -
Bisa05g0412 389 ProSitePatterns AAA-protein family signature. 223 242 IPR003960 GO:0005524|GO:0016887
Bisa05g0412 389 Pfam ATPase family associated with various cellular activities (AAA) 121 250 IPR003959 GO:0005524|GO:0016887
Bisa05g0412 389 Pfam AAA+ lid domain 273 309 IPR041569 -
Bisa05g0412 389 Gene3D - 252 334 - -
Bisa05g0412 389 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Bisa05g0412 389 CDD RecA-like_ATAD1 84 249 - -
Bisa05g0412 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 312 IPR027417 -
Bisa05g0412 389 Gene3D - 79 337 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0412 Bisa-ChrBisa05 6864283 6870732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0412 36 317 Calmodulin-binding Proteins AT3G56690 33.217 9.56e-39 146