Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0409 ATGGCGGGGCCGGCATTGATTTTGTACGCAGCGAGCGCCGCTTTGAGTTGCTCGGTCTTGTTCGCCAGGCTTCGTCAACTCGACCCGAACCGTGAGACATCGAAAAAGGCTTTTGAGCAAAAGAAAGAGATAGCCAAGCGTTTAGGTCGTCCTTTCATTCAGACAAACGAATATGAGGATGTTATAGCCTGTGATGTTGTAAATCCTGACGGCATCGACGTGGAGTTTGACTCCATTGGGGGACTGAAAAGGATCAAGCAAACTTTGTGTGAGCTTGTTATACTGCCTCTAAAAAGACCAGACCTATTTTCTCATGGCAAGCTTCTTGGGCCACAAAAAGGTGTACTGTTGTATGGACCACCTGGAACTGGGAAAACTATGCTTGCCAAAGCTATTGCGAAGGAGTCTGGAGCAGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTTGGTGAAGCCCAAAAGCTTGTGGCGGCTGTATTTAGCCTTGCTTATAAGCTCCAGCCTGCCATCATATTCATTGATGAAGTTGACAGTTTTTTGGGCCAGCGTCGTACAACAGATCATGCGGCGTTATTAAGCATGAAAACTGAGTTCATGGCCTTGTGGGATGGATTTACCACAGACCAGAATGCTAGAGTTATGGTCCTCGCAGCTACTAATCGTCCTGCAGAACTTGATGAAGCAATACTTCGACGTCTTCCCCATGCCTTTGAAATTGGGGTTCCAGATCGAAGGGAGAGGGTGGAGATATTGAAGGTTATATTGAAGGGTGAGAATGTTGAGGACAGCATTGACTTTGATCATATAGCTGGCTTGTGCAAGGGCTATACTGGTTCGGATTTATTTGAACTCTGCAAGGAGGCTGCCTATTTTCCTATTAGGGAGCTACTGGAAGAAGAGAAGAATGGAAATCAGACTCCTGCACCAAGGTCAATGTCACAGTCAGATTTGGAGAAGGTCCTTGCCACTTCAAGGAAAACGAAGGTTGCTGCAAGCGAATACAGTGGATTAGGCCTACGGTCACCAAGATGGACAGGCCTACAGTGGTTGATGCAATTAATGTATTCTATTAAGCTTTTGGTTTCCCAAATTATTAACCTCCAATCAGATGCTCAGGATCCTTAA 1137 0.4547 MAGPALILYAASAALSCSVLFARLRQLDPNRETSKKAFEQKKEIAKRLGRPFIQTNEYEDVIACDVVNPDGIDVEFDSIGGLKRIKQTLCELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGEAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHAALLSMKTEFMALWDGFTTDQNARVMVLAATNRPAELDEAILRRLPHAFEIGVPDRRERVEILKVILKGENVEDSIDFDHIAGLCKGYTGSDLFELCKEAAYFPIRELLEEEKNGNQTPAPRSMSQSDLEKVLATSRKTKVAASEYSGLGLRSPRWTGLQWLMQLMYSIKLLVSQIINLQSDAQDP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0409 378 Gene3D - 73 331 IPR027417 -
Bisa05g0409 378 Pfam AAA+ lid domain 267 303 IPR041569 -
Bisa05g0409 378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 304 IPR027417 -
Bisa05g0409 378 FunFam ATPase family AAA domain-containing protein 1 73 250 - -
Bisa05g0409 378 SMART AAA_5 111 247 IPR003593 GO:0016887
Bisa05g0409 378 ProSitePatterns AAA-protein family signature. 217 236 IPR003960 GO:0005524|GO:0016887
Bisa05g0409 378 Gene3D - 246 328 - -
Bisa05g0409 378 CDD RecA-like_ATAD1 78 243 - -
Bisa05g0409 378 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 44 338 - -
Bisa05g0409 378 Pfam ATPase family associated with various cellular activities (AAA) 115 244 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0409 Bisa-ChrBisa05 6827501 6832784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0409 49 311 Calmodulin-binding Proteins AT3G56690 33.083 3.65e-37 141