Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0365 ATGGACGAATCCAATGAGCAGTTCCGGAGGTGCAACAGAAGTTCGAGTAGCGGCTGGAGGTGCAGCGAAAGAGCAGTTACTGGAAGATCGTTATGTGAAAAACACGGCCTCTACATTAAAGAATATGGGGACCGGAGGAGGAGAGAAAATGCTTCTGGGGGTAATGGGTTAACGCACAAAAGAAGGAAGCGGAAACAACCCAACATTGAAGAAATTCCGGAAACTTTGCTTGTGGGTCATGTTGGGGATAGAGTTCAGGACAACGGTGGTTCGAATGTCGTTGAAAAAATTGGACGCCGTTTTGGTGAAGTAAAATTGAAGGCAGAGAATCCTGGCGGTGAAAGTATGGACATTGGATGTCCTGGAGTGGGACAACAACTTCAGGTGGGTGGCGAAGGGGTAGAATTTCAAACTGGGTATGGTGAGGGTGGGAGTCAGCATGCTGGTTTGGGTCGTCATGATGATGCTGATCAGCCATGGAGCAATGAACCTGCTGGTGAAAATGCTGGTAATGTTGCTGATGCTGTTCAAGAGGAGCATGAAAATGGGAGTAGCGCAGGTGTTTGTGAAAATGACGCTATAGGTCTTCCCGATGTATCTGAAGATGAAAAGTTTGGTAGCTTAAAGGTGCCTTGGGAAAGAGGCGAGCATGGCTGGCTCAAAGGATCAAAGAAGAAGACCGTTCTCGTTGTTGAAGAGGGAAGAGAACTGTCAGGTGCTGCTAGTAACGAGGAGGGAGGTGAAGTCTTGAGGATGCTGGTTAAAAGAGGTCAGCCAAAGAGTCCTAAGAATAATAATAAACAGCTTATAATAGTAAAAAACACGATCATGAATGGACAAACTGATAATAGTAATGAAATTGCGGGTACAAATGTGATAAATTGTCTTAAAGTTGTAAAGAGTGCAATGCCAACAATCTTTGATGGGAAAGAAAAGTTGCTGCCTGTTGAGATATTAGCTAATGATGAAGGTGCAGGCAAAATTGCACAACTAAAGAATCATGGTCAAACAGAGGATTTGAAAGATAAAAAGGTTATTTTGCATGCTAGTAATGGAGGTGTTGGCGGTGAGATTGTAAGGCCAAAGAAGCATGGTAGACCAAAGGGTTCAAAAAATAAAACAAAGAGTGTTATGTGTGCTATTGTTGCAGGTCCAGGTGACATTGAAATGCCAAAGAAGCGTGGTAGACCAAAGGGTTCAAAAAATAAAACAAAGAGTGTTATGTGTGCTATTGTTGCAGGTCCAGGTGACATTGAAATGCCAAAGAAGCGTGGTAGACCAAAGGGTTCAAAAAATAAAAAGAAGAGTACTCTCTGTTCCATTGTTGCAAGTGCAGGTGACGTTGAAATGCCAAAGAAGTGTGGCAGACCAAAGGGATCAAAAAATAAAAGGAAGATTATTGTGTGTGCCAGTAATGCGGGTGCAGGTAACATTCAAACACTAAAGAAGCGTGGTAGACCACCGGGTTCAAAAAATGAAATGAAGATTACTGTGAAGGCAAGTCATGAAGGTGTAGGTGACACTGAAATACCAGAAAAGCATGGTCAGCCAAAGGGTTCAAAAGATAAAGAGGACAGTACTGTGTGTGGCTGCGCTGGTAACACAGTTGCTGGTCACATGGAAACCCCAAAGAAGCGTGGTAGACCAAAGGGTTCCAAAAATAAAATGAAAAACATTGTTGGTGCAAGTAATGATGGTGCAGGTGAAATTGAAAAACCCAAGAAGTGTGGTAGACCAAAGGGTTCGAAAAATAAAAAAAAGAGTATTGCGTGTGCTAGTAATGCAGGTTCAGAGGACAATGAAACACCAAAGATGCCAACAGTAAAGCATGGTTGGCCATGGGTCTCAAAAAACAAGAAAGATTTAGCAGATCAGACAAATCAGGAAATGCCTGGCAAAGTTATGTTTGTTCATAAAGACAGTGATAAAACTATTGGTCTGACAAGTTTGGGAAATCATGTAAATAGTATTGTAGGTGAGCAATATATAGGTTCACTTGTTGAAACCACTAGTAGTAAAGAGTGTGAAGAAGAGGATCGACAGCCAAAGGAAGGTGTTCAATTACTGTGTTCAAAAATTGAGGGAATAACTTTTGAAGCTCTAGAAGATGAGGGAATGCCCAGTGAAGGGGTGTTGGTCAATGGTGGTAGTGAAAAAACTGGTAAGGCATTTGGTTTGGAATATTGTAGGGCTACTCTTGTCAGTGATGGGGTTCAAAATGTGCCTGCTAAGGCCTTTGGTGATGGCAAGGTTGAAAATGAGAATAACAATGTTAAAAACCATGATCGACCAAAAGATTCTAAAAATAAGAAAATTTTTTTTAGTAAAGATAAAGAGCATTTGACTAGAAAAATTATTGGTGAATCTTATCAGGAGATGGAGGCCATTAGGTTTCCTAGACCAGAAAATGGGATAATTTCTTCCGAAGTTGAGGCAGACAAGGAATTTCCTGGCCGCAGATCTTGTGTATATGGAGCTGGAAGCAAGTTTGAGAGGGAAAAGAATGAGTGGGGCAGGCGAAAGGGCTCTGGTAAAAAGGAAAAGGAGACTGTTTGGTTTTTTGATCCGAAGACTGAGAGGCATGGTAATGTAGCAGAGACAGATGGAAGAACATCTGCTGAAGCTTGCTGTAGAGATGACATTGATCAATGGAAAGATATGCATGAAAAACAAAGGATTTTTAGAAATAGGAGGCTAACTAGTAATCACTACCAATTGAGGGGTTCAAGAGGAAAGGCACTGCCTACTGCTGCTGTGGAAAGTGAAAGTGAGCCAGTTGAAGTTTTGAATGAATCAGGGAGAAATGAGAGATCAAATAATAAGCGAGGCCGATCCTTACAAAATAAGAAGAGAATTCTCTTTAGCAGAGTGGTTGGATACTCAAAAAAGCCTGGACATAAAAAGATGAAAACAAAATGGTTAACATATGGATCTGGCGGAATTTGGACAAGGTCTAGTGGAAAAATGGGAAAGTTGTCAAACCATGGATTGGAATCTTCAGGTTTGATGGAGGATGTATCCATAGAGAATGGGAATGTTGAACCAGATGCAGATATCAATTTACAAAAGTTGCTTTACTTGCTTAAGAAAACTCTGCCTTTACTCCACCATATCCAACAAGAGCAGAGATCAGAAATGGAAGTAGAAGCTAGCATGCATGGTCCTCTGATTTTGTCTAGTTTGCAACTGATGGAAGAGGATATTATGCAGTCACAAATTGATAATGATGATCGAGTGTATTGTGACAACTGCAATACATCCATTGTCAATTTCCACAGAAGCTGTCCTAATCCTAATTGTAGTTATGATCTCTGTCTCACTTGTTGCATGGAGCTAAGAAAGGGACTTCACTGTGGGGAAATTCCCACTAATGGGAGTGAGGGAGACGCTGATATCTCATCTGACTCTTTTTGGAAAGCAGACATAAATGGTAGGATTCCTTGCCCTCCAAAAGCGAGGGGAGGTTGTGGGACTACAGTTCTCTCATTGAGGCGCCTTTTTGAAGCTAATTGGGTTGACAAACTGATTAGGAATGCAGAGGAACTCACCATCAAATATCAGCCCCCAAATGTTGATTTTACTAAAGATTGTTTATTGTGCCATAATTTTGGGATTAATGGAGTACAGGAGCCTGTAAGGCAGGCAGCTTCGAGAGAAAACAGTCATGATAATTTTTTGTTCTGCCCAAATGCTATGCACATGGGAGATGCAGAATTCGAGCATTTCCAGATGCATTGGATAAGAGGTGAACCTGTTATAACTAGGAATTCGTTTCAAAAGGCTAGTGGCCTTAGCTGGGACCCAATGGTGATGTGGAGGGCTTTTAGGGGCGCAAAGAGAATATTAAAAGAGGAGGCAGCTGTGTTTAAAGCCATTGACTGCTTGGATTGGTGCGAGGTTGAAATTAGTATCTTACAGTTCTTCAAGGGCTACATGGAAGGTCGTAGATACAGAAATGGGTGGCCAGAGATGTTGAAGCTAAAGGATTGGCCTCCGTCAAATGTTTTTGAAGAGTGCTTGCCTAGGCATGGTGCTGAGTTTATGGCCATGCTTCCATTTAGTGACTATACCCATCCCAAATCTGGTATTCTAAATCTTGCTACTAAGCTCCCTGTTGTTTTAAAGCCAGATTTGGGACCCAAAACATACATTGCTTATGGATCTTTGGAAGAGCTCGCTGATTTGCTGCTAATTCCACTCATGGAGTCATGCTGTGCTGATGAGCAGGTCAATATACTGACACATGCTGCTGAAGTAAAGAGACCTCCATGGCAAAGCAAAACGATAAACAAATTACAGAAAAAGTATGAAGCTGAAGACATGTGTGAGCTCTATGGCAGGAAGAATGAAGCATCAGGTGCACGTGGAAGAAAACCAAAACGGCGTCGCCTAGATAGAAGCATAGGTCCTAAAAGCCCTGGAAAAGAAGAGAATAATGTGGGAGACTCCACCGTACTTGAAAGTCAAGGAAGAGAAGAGGATACAAATGTACATCGGAGAAGATCTATGGATTCGGGACACTCTAGAGCTTATACTGCATCTTGTGCACTAAAATGCTCAGCTTCTCCCAAAAGTAAAGTAAAAGACTATGAAAGGACAAATTATGAAATCAAGAATGCAGTCCAAAAAGGCTCATCATCATATGACAGACCTTGTAAAGGAATTTCATTACCTGAAGATATGCAGTCTATAACATTCACCAAAGACATTTATGAAAAAGAGAAAACTTTTTGTATGCATGAAAATAATAGGCCTTGCTTTGTCAAAGATCAACCTGATAAATGTACCTTCTACGTTGATTTGAATTCATGCACTCCACCATTCAGGGTAAGTCAGGAACATTTGACAAATTGTACAGAACAATCTGACTCAAAAGGCAGTCCCAACATGAAGCGTGATTGTCACAGTTCCTACGCTGGTAATGATGTTTCTGATTTCTTTTTCCCTTGGGAGCAAAATTCAGCCATTAAACGTCCTTCTGTTTGTGGAAATGTGGATGACACTGGCATTGAAAGCTCTTTGAAAGAGAGGACTAATACAGATTATGACCCTACCCTCCAACAAGGTGCTATAAAGGATATCAAAAGACTTCCGAATAGTCAAGATAGAGCAGAAGAAGCAAAATTGTACAACAGATTCAATTCTTCAGGGGCATGTTCAGAAATGAAGACTGACAAAATAGAGTCAAATAAAAATGGCATGAAAACAACAAAAGATGTCCTCGAAAATGATGATGGGTCAGAGACTCAATATGGGAGTGCTATATGGGACATATTTCGTAGGCAGGATGTACCAAAGCTAATGGAGTATCTAAAGAAACATCACAGAGAATTCCGCCACATAAATAATCTTCCAGTGAATTCTGTGCGCGTTGAACCATGGACATTTGAGCAACACGTTGGGGAGGCTGTTTTCATACCTGCAGGGTGCCCACATCAAGTGAGGAATAGACAGTCTTGCATAAAAGTGGCTCTTGACTTTGTTTCGCCTGAAAATGTTCAAGAGTGCATTAGATTGACGGAGGAGTTTCGGCTGCTTCCAAAGAACCATAGATCTAAGGAAGATAAACTGGAGATAAAGAAGATGGCGCTTTACGCTGCAGATTTTGTCAGCAGTAGAAGAGGAAATCTGGCAACCTCCAACATAGATGGTTCTCACATTATTTGCTGTTGGTTTTGA 5679 0.4131 MDESNEQFRRCNRSSSSGWRCSERAVTGRSLCEKHGLYIKEYGDRRRRENASGGNGLTHKRRKRKQPNIEEIPETLLVGHVGDRVQDNGGSNVVEKIGRRFGEVKLKAENPGGESMDIGCPGVGQQLQVGGEGVEFQTGYGEGGSQHAGLGRHDDADQPWSNEPAGENAGNVADAVQEEHENGSSAGVCENDAIGLPDVSEDEKFGSLKVPWERGEHGWLKGSKKKTVLVVEEGRELSGAASNEEGGEVLRMLVKRGQPKSPKNNNKQLIIVKNTIMNGQTDNSNEIAGTNVINCLKVVKSAMPTIFDGKEKLLPVEILANDEGAGKIAQLKNHGQTEDLKDKKVILHASNGGVGGEIVRPKKHGRPKGSKNKTKSVMCAIVAGPGDIEMPKKRGRPKGSKNKTKSVMCAIVAGPGDIEMPKKRGRPKGSKNKKKSTLCSIVASAGDVEMPKKCGRPKGSKNKRKIIVCASNAGAGNIQTLKKRGRPPGSKNEMKITVKASHEGVGDTEIPEKHGQPKGSKDKEDSTVCGCAGNTVAGHMETPKKRGRPKGSKNKMKNIVGASNDGAGEIEKPKKCGRPKGSKNKKKSIACASNAGSEDNETPKMPTVKHGWPWVSKNKKDLADQTNQEMPGKVMFVHKDSDKTIGLTSLGNHVNSIVGEQYIGSLVETTSSKECEEEDRQPKEGVQLLCSKIEGITFEALEDEGMPSEGVLVNGGSEKTGKAFGLEYCRATLVSDGVQNVPAKAFGDGKVENENNNVKNHDRPKDSKNKKIFFSKDKEHLTRKIIGESYQEMEAIRFPRPENGIISSEVEADKEFPGRRSCVYGAGSKFEREKNEWGRRKGSGKKEKETVWFFDPKTERHGNVAETDGRTSAEACCRDDIDQWKDMHEKQRIFRNRRLTSNHYQLRGSRGKALPTAAVESESEPVEVLNESGRNERSNNKRGRSLQNKKRILFSRVVGYSKKPGHKKMKTKWLTYGSGGIWTRSSGKMGKLSNHGLESSGLMEDVSIENGNVEPDADINLQKLLYLLKKTLPLLHHIQQEQRSEMEVEASMHGPLILSSLQLMEEDIMQSQIDNDDRVYCDNCNTSIVNFHRSCPNPNCSYDLCLTCCMELRKGLHCGEIPTNGSEGDADISSDSFWKADINGRIPCPPKARGGCGTTVLSLRRLFEANWVDKLIRNAEELTIKYQPPNVDFTKDCLLCHNFGINGVQEPVRQAASRENSHDNFLFCPNAMHMGDAEFEHFQMHWIRGEPVITRNSFQKASGLSWDPMVMWRAFRGAKRILKEEAAVFKAIDCLDWCEVEISILQFFKGYMEGRRYRNGWPEMLKLKDWPPSNVFEECLPRHGAEFMAMLPFSDYTHPKSGILNLATKLPVVLKPDLGPKTYIAYGSLEELADLLLIPLMESCCADEQVNILTHAAEVKRPPWQSKTINKLQKKYEAEDMCELYGRKNEASGARGRKPKRRRLDRSIGPKSPGKEENNVGDSTVLESQGREEDTNVHRRRSMDSGHSRAYTASCALKCSASPKSKVKDYERTNYEIKNAVQKGSSSYDRPCKGISLPEDMQSITFTKDIYEKEKTFCMHENNRPCFVKDQPDKCTFYVDLNSCTPPFRVSQEHLTNCTEQSDSKGSPNMKRDCHSSYAGNDVSDFFFPWEQNSAIKRPSVCGNVDDTGIESSLKERTNTDYDPTLQQGAIKDIKRLPNSQDRAEEAKLYNRFNSSGACSEMKTDKIESNKNGMKTTKDVLENDDGSETQYGSAIWDIFRRQDVPKLMEYLKKHHREFRHINNLPVNSVRVEPWTFEQHVGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVQECIRLTEEFRLLPKNHRSKEDKLEIKKMALYAADFVSSRRGNLATSNIDGSHIICCWF 1892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0365 1892 Pfam JmjC domain, hydroxylase 1788 1827 IPR003347 -
Bisa05g0365 1892 SMART cupin_9 1340 1844 IPR003347 -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 746 768 - -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 138 169 - -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 1450 1506 - -
Bisa05g0365 1892 SMART AT_hook_2 421 433 IPR017956 GO:0003677
Bisa05g0365 1892 SMART AT_hook_2 481 493 IPR017956 GO:0003677
Bisa05g0365 1892 SMART AT_hook_2 391 403 IPR017956 GO:0003677
Bisa05g0365 1892 SMART AT_hook_2 361 373 IPR017956 GO:0003677
Bisa05g0365 1892 SMART AT_hook_2 451 463 IPR017956 GO:0003677
Bisa05g0365 1892 SMART AT_hook_2 573 585 IPR017956 GO:0003677
Bisa05g0365 1892 SMART AT_hook_2 543 555 IPR017956 GO:0003677
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 1 27 - -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 500 612 - -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 754 768 - -
Bisa05g0365 1892 SUPERFAMILY Clavaminate synthase-like 1751 1865 - -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 352 373 - -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 587 601 - -
Bisa05g0365 1892 ProSiteProfiles JmjC domain profile. 1610 1844 IPR003347 -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 43 69 - -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 500 525 - -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 1487 1506 - -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 417 436 - -
Bisa05g0365 1892 Gene3D Cupin 1696 1853 - -
Bisa05g0365 1892 Gene3D Cupin 1224 1467 - -
Bisa05g0365 1892 ProSiteProfiles WRC domain profile. 5 53 IPR014977 -
Bisa05g0365 1892 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 420 1868 IPR045109 GO:0032454|GO:0033169
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 927 943 - -
Bisa05g0365 1892 MobiDBLite consensus disorder prediction 906 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0365 Bisa-ChrBisa05 6116351 6128188 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa05g0365 JmjC 2.6e-09 CL0029