Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0360 ATGGACTACGGCAAGCTCCGGCCCTCCGACCCGGGCGGCTCCTCCCGTTCAGATATTCCCATTGCCAAGCCCAGCTCCACAACCAGCAAGAAGAAACTCATATTATTATCTCTACTCGCCGTCCTTTTGATCGTCGCCTCCGCTGTCTCTGCTGTCTTCGTAGTCGGGAGCCGGGCCCGGGCTTCGGGCCAAAACGGGCCGGCCCTCGGCGGGAGGCCCACGCAGGCTATGTCGCGGGCCTGCAGCAAAACCCAGTACCCCACGCTCTGTGTGAACTCGCTGCTGGAGTTCCCGGGCTCCACCACCGCGTCGGAGCAGGACCTGGTGCACATTTCCTTCAACGTCACCCTGCAGCACCTGAGCAGAGCCCTCTACTCCTCCACCGGGATCTCCACCGTCCAGATGGAGCCACGTGTACGGTCGGCGTACGAGGACTGCCTGGAGCTCCTGGATGACTCCGTGGACGCGCTCCTCCGCTCCCTCACCTCAGTCGCCGGAGGCGGTGGAGGCTCCACGGAAGACGTACTGACATGGCTGAGCGCCGCCCTCACGAATCAAGACACGTGTGCGGAGGGATTCGTGGACACTAGCGGGAGCGTGAAGGATCAGATGGCTAATAATCTGAAGGACCTGTCAGAACTCGTGAGCAATTGTCTGGCGATATACTCGGGGAGCGAGAACAGCGATTTCTCTGGGGTTCCGATTCAGAACAGGAGAAGATTAATGGGCGAGAAGATGGATAATGAGGATCATATCTCGGGGAAATTTCCGACATGGTTGAATGGAAGAGATAGGAGATTGTTGAGTGTACCGGTGTCGGCGATACAAGCCGATATTGTGGTGGCGAAGGATGGGAGTGGAACGGTGAAGACGATCACGGAGGCGATCAAGAAGGTGCCGGAGCATAGTAGCCGTCGGATTATTGTGTACGTGAAGGCCGGAAGGTACGAGGAGGAAAATTTGAAGGTGGGGAAGAAGAAAACGAATGTAATGTTCATAGGAGACGGGAAGGGTAAAACGGTCATCACAGGTGGAAAAAATTTTAACGATGGCTCCACCACATTCCACACCGCTTCCTTCGCTGCTTCTGGTGCGGGGTTCATTGCACGAGATATGACGTTCGAGAACTACGCCGGGCCGGGGAAGCACCAAGCGGTGGCCCTCCGTGTCGGAGCTGACCACGCGGTGGTGTACCACTGCAGCATCATCGGATACCAAGACGCGTGCTATGTCCACTCTAATCGTCAGTTCTTCAGAGAATGTGACATTTACGGAACCGTGGATTTCATTTTTGGCAATGCGGCTGTGGTTTTCCAAAAGTGTAACCTGTACGCTCGAAAGCCCATGCCCAATCAGAAGAACACCATCACGGCCCAAAACCGAAAGGATCCGAATCAGAACACGGGTATATCCATCCACAATTGTCAGATCCTCGCCACCTCAGATCTCCAGGCAGCCAAGGGAAGCATCCCCACCTATCTGGGCCGTCCATGGAAGCTCTACTCTAGAACCGTTTACATGCTATCCTACATGGGTGACCACATAAATCCACGTGGATGGTTGGAGTGGAATGGAGCATTTGCACTTGATACATTGTACTATGGGGAGTACATGAATAGTGGGCCGGGTGCGGCTGTTGGGCAACGGGTCAAATGGCACGGGTATCGGGTCATCACGTCGACGGTGGAGGCGAGTAGGTTTACAGTGGGCCAATTCATAGCAGGATCGTCGTGGCTGCCGAGGACCGGAGTGGCATTTGTGGCCGGCTTATCCATGTAA 1779 0.5559 MDYGKLRPSDPGGSSRSDIPIAKPSSTTSKKKLILLSLLAVLLIVASAVSAVFVVGSRARASGQNGPALGGRPTQAMSRACSKTQYPTLCVNSLLEFPGSTTASEQDLVHISFNVTLQHLSRALYSSTGISTVQMEPRVRSAYEDCLELLDDSVDALLRSLTSVAGGGGGSTEDVLTWLSAALTNQDTCAEGFVDTSGSVKDQMANNLKDLSELVSNCLAIYSGSENSDFSGVPIQNRRRLMGEKMDNEDHISGKFPTWLNGRDRRLLSVPVSAIQADIVVAKDGSGTVKTITEAIKKVPEHSSRRIIVYVKAGRYEEENLKVGKKKTNVMFIGDGKGKTVITGGKNFNDGSTTFHTASFAASGAGFIARDMTFENYAGPGKHQAVALRVGADHAVVYHCSIIGYQDACYVHSNRQFFRECDIYGTVDFIFGNAAVVFQKCNLYARKPMPNQKNTITAQNRKDPNQNTGISIHNCQILATSDLQAAKGSIPTYLGRPWKLYSRTVYMLSYMGDHINPRGWLEWNGAFALDTLYYGEYMNSGPGAAVGQRVKWHGYRVITSTVEASRFTVGQFIAGSSWLPRTGVAFVAGLSM 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0360 592 PANTHER PECTINESTERASE 45 580 - -
Bisa05g0360 592 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Bisa05g0360 592 CDD PMEI-like_3 80 221 - -
Bisa05g0360 592 NCBIfam pectinesterase inhibitor domain 61 222 IPR006501 GO:0004857
Bisa05g0360 592 Pfam Pectinesterase 278 575 IPR000070 GO:0030599|GO:0042545
Bisa05g0360 592 Pfam Plant invertase/pectin methylesterase inhibitor 77 221 IPR006501 GO:0004857
Bisa05g0360 592 FunFam Pectinesterase 272 590 - -
Bisa05g0360 592 FunFam Pectinesterase 73 225 - -
Bisa05g0360 592 Gene3D - 272 590 IPR012334 -
Bisa05g0360 592 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 224 IPR035513 -
Bisa05g0360 592 SUPERFAMILY Pectin lyase-like 273 589 IPR011050 -
Bisa05g0360 592 SMART PMEI_2 72 221 IPR006501 GO:0004857
Bisa05g0360 592 MobiDBLite consensus disorder prediction 1 23 - -
Bisa05g0360 592 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 222 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0360 Bisa-ChrBisa05 6002241 6005248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0360 1 591 Carbohydrate Esterase AT5G53370 66.946 0.0 823