Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0354 ATGATAATCAAGCGGAACCTGAAAACCCAAATGCCGAGTTTGAAACGGTGCAAAACCGGTGACTCGGCGGGTGAAGACGATGACTGCTGCGCGGCTCGGAAGAAGAGGAAGGCTAATAATGGGTATTACCCTTTGAATCTTCTCGGCGATGTCGCTGCCGGTATACTTCCCGTGAGCTTCCATGGCTTACTAGGCGCTGGTGTTTCTGAGAAGGGCTTTTCTGCATCATGGTCTACCGATGTCTCGTGCTCCCCTGTTGAGGTGGAGTCGAAGTCGAAGTCGAAGGGTGGGAACTCCGAAAGAGCTCAGATGAATCGGCCTGTGGAGGAACCACGGCCGCCACTGGTCAGAACGTCAAGAGGTCGAGTTCAGGTACTGCCTTCGCGTTTTAACGACTCCGTTATTGAGAATTGGAAGAAAGATAGTAAGATTAGCTCTCGTGATTATAGCTTTGAAGATGAACTTGATAGTAAAAAGGAGAAATTTAGTTTTAGGACACCGAAATCATACAATCAGATTACAAGGAAAGGAAGAAACGATGATAAAACTGGCTGTAAGTCTCGCAAGTATTCAGCATTGTGTGAGGATGAGGATGAGGCAAGAGAGGACGGGCCTGTAAGGTATAGGAATTTTGATACGAGGAAGTATTTAACTTCACGTACTGCACTCAACTCAAAGCGCGAGCAATCAATTGGAGATGAGAGAGGCGGTTTCTTGGATATGGAGGAAGTTGATATAACAGAAAATGAGGGAATTCTAAAGGAGAATGACGAGAAAAAAGGTGAATTATATGGACCAGAAGACTTTTACGCAGGTGATATAGTGTGGGCCAAAGCAGGAAAGAAGGAGCCTTTTTGGCCAGCCATTGTCATTGATCCAATGTCTCAGGCACCTGAGCTGGTCTTGAGGTCTTGTATAGCCGATGCGGCTTGCGTGATGTTTCTTGGGTACTCTGCGAATGAAACTCAAAGGGACTATGCATGGGTGAAGCGTGGGATGATTTTTCCATTTATAGATCATGTAGATAGGTTTCAGGGACAGATTGAATTGAGTTACTGTAATCCATCCGATTTTCAAGTGGCAATAGAGGAGGCATTCTTGGCGGATCAGGGATTTACAGAGAAGTTGATAGCAGATATAAATATAGCAGCTGGCAACACATGGTATGATGAAACCATTTTAAAAGGCATTCAGGAGGCCACTGGTTCTAAACATTATGCAGGATGTCACTTTCTGAACCAGGATTTATTTGACAAGAGGAAAGACACGCGACCTTGTGAAGCCTGTGGATTGGATCTTCCTTCCAAAATGTCAAAGAAAACGAAAGATTCAACTCCTGGTGGCCAAGTTTTATGTAAAACATGTGCCAGGTTAACAAAATCGAAACATTATTGCGGCATATGCAAGAAAATTTGGAATCATTCAGATAGTGGAAGCTGGGTGCGCTGTGATGGATGTAAGGTGTGGGTGCATGCGGAATGCGACAAAATTTCCAGCAACCTTTTCAAGAATCTTGGAGGCACTGATTACTACTGCCCTACTTGTAAAGCAAAGTTTGATTTTGAGTTATCTGATTCAGAAAAACCACAGCCAAAAGTCAAATGGAACAAGAACAACGGGCAGCTAGTGCTACCAAATAAGGTTACTGTTCTCTGCAATGGTGTTGAAGGCATATATTTTCCTAGCCTTCACTTAGTTGTGTGCAAGTGTGGTTTTTGTGGGACAGAAAAGCAAGCACTTAGTGAATGGGAGCGACACACGGGTTCCAAATCAAGAAATTGGAGAACAAGTGTTAGGGTGAAAGGCTCCATGCTGCCACTGGAACAATGGATGCTGCAATTGGCAGAATTTCATGCCAATGCCCTAGTTTCTGTCAAACCTAAAAAACCTTCTTTAAAAGAAAGGAAGCAGAAGTTGCTTACATTTTTGCAAGAAAAATATGAACCTGTTTATGCTAAGTGGACAACGGAACGGTGTGCTGTATGTAGATGGGTAGAAGATTGGGACTATAACAAAATTATCATTTGCAACAGATGTCAAATAGCCGTTCATCAAGAATGCTATGGGGCAAGAAATGTTCGAGACTTTACGTCGTGGGTTTGTAAAGCCTGTGAAACACCTGACATCAAACGAGAGTGTTGTCTTTGTCCTGTAAAAGGTGGTGCCTTAAAACCAACTGATGTGGACACCTTATGGGTTCATGTGACTTGTGCTTGGTTCCGGCCTGAAGTCTCTTTTGCTAGTGATGAAAAGATGGAGCCTGCTTTGGGCATTCTGAGTATTCCATCAAATTCTTTCGTGAAGATTTGTGTTATATGTAAGCAAATTCATGGTTCATGCACACAATGTTGCAAGTGTTCCACTTATTTTCATGCCATGTGCGCATCAAGGGCTGGGTACCGCATGGAGTTGCATTGTTTGGAGAAAAGTGGTAGGCAGACAACAAAAATGGTTTCTTATTGTGCATACCACAGGGCTCCAAATCCAGACACTGTTTTGATTATGCAAACCCCGCTTGGGGTTATTTCAACCAAAAACCTTCTCCAAAATAAGAAAAAATCTGGGTCAAGGTTAATTTCATCTCATAGAGCAAAGCTAGAAGAAACTCTTTCTGTAGATAACATTGAGCATGAGCCATTTTCCGCTGCTAGGTGCCGTGTCTTTCAAAGAACAAATCTTAGCAAAAAGAGAGCAGCAGATGAAGCCATTTCTCATCGAGCAAAGGGTCATAGCCATCATCCTTTGGACGCGATAAAGAGATTAAATGCGTACAGGGTCATAGAGGAGGCTCCAACATTTTCTTCTTTTAGAGAACGTCTATACCATTTACAGAGAACTGAGAATGAACGGGTTTGCTTTGGTAGATCAGGCATACATGGATGGGGCCTCTTTGCACGTAGAAATATTCAAGAAGGAGAAATGGTTCTCGAATATCGTGGTGAACAAGTAAGACGCAGCATAGCAGATCTGAGGGAAACACGCTATAAGAAAGAAGGCAAAGACTGCTACCTTTTTAAGATAAGCGAAGAAGTGGTGGTAGATGCCACTGATAAAGGAAATATAGCCCGACTTATTAACCATTCTTGTATGCCAAATTGCTATGCAAGAATTATGAGTGTGGGTGATGACGAGAGTCGTATTGTACTCATTGCCAAGACTAATGTGCCTGCTGGTGATGAACTAACGTATGACTACTTGTTTGATCCTGATGAACCAGATGAAAACAAAGTCCCATGTTTATGTAAAGCTCCAAATTGCCGGAAATTCATGAATTAG 3276 0.4283 MIIKRNLKTQMPSLKRCKTGDSAGEDDDCCAARKKRKANNGYYPLNLLGDVAAGILPVSFHGLLGAGVSEKGFSASWSTDVSCSPVEVESKSKSKGGNSERAQMNRPVEEPRPPLVRTSRGRVQVLPSRFNDSVIENWKKDSKISSRDYSFEDELDSKKEKFSFRTPKSYNQITRKGRNDDKTGCKSRKYSALCEDEDEAREDGPVRYRNFDTRKYLTSRTALNSKREQSIGDERGGFLDMEEVDITENEGILKENDEKKGELYGPEDFYAGDIVWAKAGKKEPFWPAIVIDPMSQAPELVLRSCIADAACVMFLGYSANETQRDYAWVKRGMIFPFIDHVDRFQGQIELSYCNPSDFQVAIEEAFLADQGFTEKLIADINIAAGNTWYDETILKGIQEATGSKHYAGCHFLNQDLFDKRKDTRPCEACGLDLPSKMSKKTKDSTPGGQVLCKTCARLTKSKHYCGICKKIWNHSDSGSWVRCDGCKVWVHAECDKISSNLFKNLGGTDYYCPTCKAKFDFELSDSEKPQPKVKWNKNNGQLVLPNKVTVLCNGVEGIYFPSLHLVVCKCGFCGTEKQALSEWERHTGSKSRNWRTSVRVKGSMLPLEQWMLQLAEFHANALVSVKPKKPSLKERKQKLLTFLQEKYEPVYAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVRDFTSWVCKACETPDIKRECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCCKCSTYFHAMCASRAGYRMELHCLEKSGRQTTKMVSYCAYHRAPNPDTVLIMQTPLGVISTKNLLQNKKKSGSRLISSHRAKLEETLSVDNIEHEPFSAARCRVFQRTNLSKKRAADEAISHRAKGHSHHPLDAIKRLNAYRVIEEAPTFSSFRERLYHLQRTENERVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRETRYKKEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRIVLIAKTNVPAGDELTYDYLFDPDEPDENKVPCLCKAPNCRKFMN 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0354 1091 SUPERFAMILY FYVE/PHD zinc finger 462 519 IPR011011 -
Bisa05g0354 1091 ProSiteProfiles Extended PHD (ePHD) domain profile. 710 825 IPR034732 -
Bisa05g0354 1091 FunFam Histone-lysine N-methyltransferase 708 827 - -
Bisa05g0354 1091 CDD ePHD_ATX3_4_5_like 713 824 IPR041955 -
Bisa05g0354 1091 Pfam PHD-finger 464 517 IPR019787 -
Bisa05g0354 1091 ProSitePatterns Zinc finger PHD-type signature. 659 704 IPR019786 -
Bisa05g0354 1091 PANTHER PHD FINGER PROTEINS 65 531 - -
Bisa05g0354 1091 Pfam PHD-finger 671 705 - -
Bisa05g0354 1091 MobiDBLite consensus disorder prediction 86 119 - -
Bisa05g0354 1091 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 708 827 IPR013083 -
Bisa05g0354 1091 ProSiteProfiles Post-SET domain profile. 1075 1091 IPR003616 -
Bisa05g0354 1091 SUPERFAMILY Tudor/PWWP/MBT 262 368 - -
Bisa05g0354 1091 ProSiteProfiles SET domain profile. 949 1066 IPR001214 GO:0005515
Bisa05g0354 1091 SMART PostSET_3 1075 1091 IPR003616 -
Bisa05g0354 1091 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 457 520 IPR013083 -
Bisa05g0354 1091 CDD PWWP_AtATX3-like 270 374 - -
Bisa05g0354 1091 CDD PHD_ATX3_4_5_like 658 704 IPR042011 -
Bisa05g0354 1091 FunFam Histone-lysine N-methyltransferase 646 707 - -
Bisa05g0354 1091 ProSiteProfiles Zinc finger PHD-type profile. 656 707 IPR019787 -
Bisa05g0354 1091 Gene3D - 266 371 - -
Bisa05g0354 1091 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 650 707 IPR013083 -
Bisa05g0354 1091 Pfam SET domain 960 1065 IPR001214 GO:0005515
Bisa05g0354 1091 SUPERFAMILY SET domain 939 1091 IPR046341 -
Bisa05g0354 1091 SMART set_7 949 1072 IPR001214 GO:0005515
Bisa05g0354 1091 Pfam PHD-zinc-finger like domain 712 824 - -
Bisa05g0354 1091 ProSiteProfiles PWWP domain profile. 271 340 IPR000313 -
Bisa05g0354 1091 ProSiteProfiles Zinc finger PHD-type profile. 462 518 IPR019787 -
Bisa05g0354 1091 Pfam PWWP domain 272 365 IPR000313 -
Bisa05g0354 1091 CDD PHD_TCF19_like 465 515 - -
Bisa05g0354 1091 SUPERFAMILY FYVE/PHD zinc finger 657 721 IPR011011 -
Bisa05g0354 1091 Gene3D SET domain 845 1091 IPR046341 -
Bisa05g0354 1091 CDD SET_SETD1-like 936 1087 - -
Bisa05g0354 1091 MobiDBLite consensus disorder prediction 86 101 - -
Bisa05g0354 1091 SMART PHD_3 464 516 IPR001965 -
Bisa05g0354 1091 SMART PHD_3 769 825 IPR001965 -
Bisa05g0354 1091 SMART PHD_3 658 705 IPR001965 -
Bisa05g0354 1091 FunFam Histone-lysine N-methyltransferase 923 1091 - -
Bisa05g0354 1091 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1091 IPR025780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0354 Bisa-ChrBisa05 5808193 5817888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0354 659 824 C2H2 Transcription Factor Family AT3G14740 33.526 5.99e-20 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa05g0354 zf-HC5HC2H_2 2.2e-27 CL0390