Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0340 ATGAAAAACCTCAAACGTAACCCTCCGGCGGCGGACCTCCGCCAAATGGCCTCCCATTCCAACGGTCCCTGTCACGACACTCTTTTGAAATTCAAGAATAATGCTCGCCAGAGGAGACTCAAAATCCGGCGGCTTCAGTATACCTGTGAAGCGAAAATCCACGTGGCCTCCGGCGATCGGACAGAGGAGAGGAAGTGTGCGGAGCCGGAGAATCAAGATAGAGAGATTCGTGAGTCGATGGAGATATCGCTGTCGTTAGCGACGTCGGAGGAGGAGGATCGCGCGACGTTGGCGCCAAACGACGCCGTTTTAGCAGCCTGCAAAGGGGAGAAGAAATACAAGGAGAATTATGGCGATCTGGAGGAGTTGTCGTACGGCTCGGTGTCAGTGATAGGTAGTAGGAAGGAGATGGAAGATACGGTGAGCATAGAGATGGGGATTGTAGGGAAGGAGAGAGTGAAGTGTGACTTCTTTGCGGTTTACGACGGCCACGGCGGATCTCAGGTGGCGAAAGCGTGCCGGGAGCGGCTGCACCAGCTGGTGGCGGAGGAGGTGGGAAGGCATGGCGGAAGTGGAAGCGAAATGGATTGGGAGGGGATGATGGAAGGGTGTTTTGGTAAAATGGATAGCGAGTTGGCCGATAATGCGGCGATGAGGACGGTGGGTTCTACGGCGGTGGTGGCTCTCGTAGCAAAGAAGGTGGTGGTTGTGGCCAATTGCGGCGATTGTAGGGCGGTGATGGGAAGAGGAGGTGAGGTCCTCGCTTTGTCAAATGATCATAAGCCTGACAGACCCGATGAGTTGATGCGAATCGAAGCCGCTGGTGGAAGGGTCATAAACTGGAATGGCCAACGCGTATTAGGAGTTCTTGCTACCTCCAGATCTATTGGAGATCAGTATCTTCGACCCTATGTAATATCGAAACCAGAAGTGACAGTGACGAAGCGAACCAACGAGGATGAATTCCTCATTCTGGCGAGTGATGGCTTGTGGGACGTGATCTCGAGCGAAGCTGCGTGTCAAATAGTGAGAAAATGTCTGAATGGCCGATCCAAACGTAATTCGGAAGATAAGATTGGGAACGAAAGCCTCGCAGCTGAGGCTGCAGCCTTGTTGAGTGAACTAGCAATGGCAAGGGGAAGCAGAGATAACACGAGCGTGATAGTGGTTCAGCTCAGGAACCATAATAACGACGTCCTCTCTTGA 1206 0.529 MKNLKRNPPAADLRQMASHSNGPCHDTLLKFKNNARQRRLKIRRLQYTCEAKIHVASGDRTEERKCAEPENQDREIRESMEISLSLATSEEEDRATLAPNDAVLAACKGEKKYKENYGDLEELSYGSVSVIGSRKEMEDTVSIEMGIVGKERVKCDFFAVYDGHGGSQVAKACRERLHQLVAEEVGRHGGSGSEMDWEGMMEGCFGKMDSELADNAAMRTVGSTAVVALVAKKVVVVANCGDCRAVMGRGGEVLALSNDHKPDRPDELMRIEAAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNEDEFLILASDGLWDVISSEAACQIVRKCLNGRSKRNSEDKIGNESLAAEAAALLSELAMARGSRDNTSVIVVQLRNHNNDVLS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0340 401 SMART PP2C_4 114 390 IPR001932 -
Bisa05g0340 401 FunFam Protein phosphatase 2C 51 118 399 - -
Bisa05g0340 401 ProSiteProfiles PPM-type phosphatase domain profile. 124 392 IPR001932 -
Bisa05g0340 401 Pfam Protein phosphatase 2C 125 385 IPR001932 -
Bisa05g0340 401 Gene3D - 121 398 IPR036457 -
Bisa05g0340 401 SUPERFAMILY PP2C-like 122 395 IPR036457 -
Bisa05g0340 401 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Bisa05g0340 401 CDD PP2Cc 124 392 IPR001932 -
Bisa05g0340 401 PANTHER PROTEIN PHOSPHATASE 83 392 IPR015655 GO:0004722|GO:0006470
Bisa05g0340 401 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0340 Bisa-ChrBisa05 5473688 5476226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0340 125 393 PP2C-type Phosphatase Gene Family AT1G07430 46.855 1.44e-88 273