Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0337 ATGAATATTCAGCAAGAGAAGTTTGTTAGGTTTCAGGATTGGAATTCAGAAAAGGCTTCTGAAAGCCAATATTCTGCAAATAAAATAACACACTCGGGGATATTTAGAAGTATGCTAAATTCAGTTTCAGGAAAGTTTCAAAGAAGCTTGGAATCTAGTTCTCAGAGGATAAACAGATTTAGAAAATCGTTCAGATCTTTCCCCTCTAACAGTCATCTGGCTAGGAGTTTCAGTTCTAGAAAGAAAATCCTTGATCCACAAGGCCCATTCCTTCAAAAGTGGAACAAGATATTTGTATTATCATGTGTTATTGCTGTATCATTAGATCCCTTGTTCTTTTATGTCCCTGTCATTGATGATGAGAGAAAATGCCTTTCATTGGACAACAAGATGGAGATTACAGCTACTGTTTTAAGATCCTTTTCAGATATTTTTTATATAGTCCACATAATTTTCCAATTTCGTACTGGATTTATTGCACCCTCTTCTCGAGTATTTGGAAGAGGTGTCTTGGTTGAAGATGCCTGGGCAATAGCAAAGAGGTATCTGTCATCATACTTCTTTGTCGACATTCTTGCTGTTCTGCCCCTCCCACAGGTGGTGATTTTAATCATTATTCCGAAGTTGAGGGGCTTTAAATCACAGAATACGAAGAACTTGCTGAAATTTGTTGTTTTCTTCCAATATGTGCCAAGGTTTTTACGAATCATTCCATTATATAAAGAAGTGACAAGGACCTCTGGCATTATCACTGAAACTGCTTGGGCTGGAGCTGCATTCAATCTCTTTCTTTACATGCTTGCTAGTCATGTTGTAGGTGCCTTTTGGTACTTGTTTTCTATAGAAAGAGAGACTACATGCTGGCAAGAAGCCTGTCCAAGAAATTCATCATGCAACAAGGCAGATTTGTATTGTGATGATAGTCGAGGGTTGAGCAAGATTGTTACATTCCTGAATGCTTCTTGCCCAATACAGGATGCAAATACAACGCTCTTCAATTTTGGAATATTTCTTGATGCCCTTCAATCTGGTGTTGTGGAGTCAAGAGATTTCCCGCAGAAGTTTTTTTACTGCTTTTGGTGGGGCCTTAGAAATCTGAGTTCTCTTGGTCAAAACCTGGCAACAAGTACCTATGTTTGGGAAATTTGCTTTGCAGTTTTCATTTCCATCGCTGGCTTGGTATTGTTTTCATTTCTAATTGGAAACATGCAGACATACTTGCAATCAACAACTACAAGATTGGAGGAGATGCGAGTGAAACGGAGAGATGCAGAACAGTGGATGTCTCATCGATTACTCCCAGATAGTCTGAGAGAGCGAATCAGACGGTATGAACAATACAAATGGCAAGAAACTAGAGGTGTTGATGAAGACAATTTGATCCATAATCTTCCCAAGGATTTGAGAAGGGACATTAAGCGTCATCTTTGCTTGGCTCTGCTGATGAGAGTGCCCATGTTTGAAACAATGGATGAACAACTGTTGGACGCAATGTGTGATCGACTTAAGCCAGTGCTTTACACTGAAGAAAGCTGCATTGTCCGGGAAGGAGACCCTGTGGATGAGATGCTCTTCATAATGCGAGGCAAGTTATTGACCATGACAACTAATGGTGGAAGAACAGGCTTCTTTAACTCCGAATACCTCAAGGCCGGCGACTTCTGCGGAGAGGAACTTCTCACATGGGCTCTAGACCCTCATTCCTCATCCAACCTTCCTATCTCAACCAGGACTGTCCAAACCCTATCAGAAGTTGAAGCCTTTGCTCTAAAAGCTGATGACTTAAAGTTTGTGGCATCTCAATTTCGACGTCTTCACAGTAAGCAGCTTCGCCACACCTTCAGGTTCTACTCTCAGCAATGGCGTACATGGGCTGCATGTTTCATACAAGCAGCGTGGCGCCGCTATAGTAAGAAGAAGCTTGAAGAGTCACTGTGGGAAGAGGAGAATAGGCTGCAAGATGCTTTGGCCAAGGCAGGTGGTAGTAGCTCACCTAGCCTAGGTGCCACAATATATGCTTCCAGATTTGCTGCTAATGCACTTCGAGCTTTACGTCGTAATGGCACTTGGAAGTCGAGGGTGCCGGAGAGAATGCCACCCATGTTGCTTCAGAAGCCTGCGGAACCTGATTTTGCTGCTGAAGAGCAGTAG 2151 0.4217 MNIQQEKFVRFQDWNSEKASESQYSANKITHSGIFRSMLNSVSGKFQRSLESSSQRINRFRKSFRSFPSNSHLARSFSSRKKILDPQGPFLQKWNKIFVLSCVIAVSLDPLFFYVPVIDDERKCLSLDNKMEITATVLRSFSDIFYIVHIIFQFRTGFIAPSSRVFGRGVLVEDAWAIAKRYLSSYFFVDILAVLPLPQVVILIIIPKLRGFKSQNTKNLLKFVVFFQYVPRFLRIIPLYKEVTRTSGIITETAWAGAAFNLFLYMLASHVVGAFWYLFSIERETTCWQEACPRNSSCNKADLYCDDSRGLSKIVTFLNASCPIQDANTTLFNFGIFLDALQSGVVESRDFPQKFFYCFWWGLRNLSSLGQNLATSTYVWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEDNLIHNLPKDLRRDIKRHLCLALLMRVPMFETMDEQLLDAMCDRLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLWEEENRLQDALAKAGGSSSPSLGATIYASRFAANALRALRRNGTWKSRVPERMPPMLLQKPAEPDFAAEEQ 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0337 716 SUPERFAMILY Voltage-gated potassium channels 85 408 - -
Bisa05g0337 716 MobiDBLite consensus disorder prediction 691 716 - -
Bisa05g0337 716 Gene3D - 94 410 - -
Bisa05g0337 716 Gene3D Jelly Rolls 484 604 IPR014710 -
Bisa05g0337 716 Pfam Cyclic nucleotide-binding domain 507 597 IPR000595 -
Bisa05g0337 716 FunFam Cyclic nucleotide-gated ion channel 1 484 602 - -
Bisa05g0337 716 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 61 711 - -
Bisa05g0337 716 Pfam Ion transport protein 94 413 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa05g0337 716 SUPERFAMILY cAMP-binding domain-like 415 608 IPR018490 -
Bisa05g0337 716 Coils Coil 638 658 - -
Bisa05g0337 716 Gene3D Helix hairpin bin 412 477 - -
Bisa05g0337 716 SMART cnmp_10 486 617 IPR000595 -
Bisa05g0337 716 CDD CAP_ED 486 617 IPR000595 -
Bisa05g0337 716 ProSiteProfiles cAMP/cGMP binding motif profile. 486 570 IPR000595 -
Bisa05g0337 716 FunFam Cyclic nucleotide-gated ion channel 1 413 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0337 Bisa-ChrBisa05 5453921 5461556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0337 1 715 Ion Channels AT5G53130 79.805 0.0 1171