Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0330 ATGAATATGAAATACATGTTTCTTCTTATTGTCACTTTCAAGATTATCAAGAAGAAGCTGAACAAGCTACAAGAAGCGATGGGATTCCAGACACCTCATGCTAGTAAACCGAAGGCGCAACCCGTTACCAAACCCATTCCCACACCCTATGATTCATGGGTGGCGAGACACCCTTCGGCATTGCGCTCATTTGATAAATTAATGAAAGCAGCGATTGGGAAGGACATCGTGGTGTTTTTGGACTACGATGGCACCTTATCACCCATTGTAGATGACCCTGATCGTGCTTTCATGTCTGATGAGATGCGTGCAGCGGTATGTGAAGTTGCTGTAAATTTCCCAACAGCAATAATTAGTGGAAGACGCAGGGAGAAGGTAAAAGAGTTTGTGAAGTTGAGTAACGTATATTATGCTGGAAGCCATGGGATGGACATAATGGCACCATCAATGCCAGTTAGATCTTCTGATGCCGACCACTTTGACTTGGTCCTTGACGCTGCAAAGGGCAATGGAGTTCCCTTTCAACCTGCGAAGAAGTTTTTGCCTGCCATTCAAGAGATAGTGAAAGTATTAGAGAATAAAACAAGAGACATACAAGGTGCAAGGGTAGAGGACAATGGCTTCTGCGTCTCTGTGCATTTCCGCCAGGTCCAAGAAAAGGACCATGAGGAATTAGAAGAGATAGTGAGGTCAGTGCTTCAACAACATGCAGACTTTCGTCTAACTGAGGGTAAAAAGGTTATGGAAATAAGGCCATCCATAGAATGGAACAAAGGTCACGCCCTAGAATATTTTCTTGACAGTCTAGGGTTTGGCAGTTCCACCAACATCCTTCCCGTGTACATCGGCGATGATCGAACCGATGAAGATGCTTTTAAGGTGATACACAGTCGAGGAACAGGGTACCCAATTATAGTGTCCACAGTTCCAAAGGACACAAAAGCTTTGTACTCTTTGAGAGACCCCTCAGAAGTGTTAATATTCTTGTCACGGCTTGCGAAATGGAGGAAAACTGCTTGCTCCAGCATGCCATTGAATTTTGGTTAA 1047 0.4422 MNMKYMFLLIVTFKIIKKKLNKLQEAMGFQTPHASKPKAQPVTKPIPTPYDSWVARHPSALRSFDKLMKAAIGKDIVVFLDYDGTLSPIVDDPDRAFMSDEMRAAVCEVAVNFPTAIISGRRREKVKEFVKLSNVYYAGSHGMDIMAPSMPVRSSDADHFDLVLDAAKGNGVPFQPAKKFLPAIQEIVKVLENKTRDIQGARVEDNGFCVSVHFRQVQEKDHEELEEIVRSVLQQHADFRLTEGKKVMEIRPSIEWNKGHALEYFLDSLGFGSSTNILPVYIGDDRTDEDAFKVIHSRGTGYPIIVSTVPKDTKALYSLRDPSEVLIFLSRLAKWRKTACSSMPLNFG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0330 348 Gene3D - 157 253 - -
Bisa05g0330 348 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 18 339 IPR044651 GO:0004805|GO:0005992
Bisa05g0330 348 NCBIfam trehalose-phosphatase 75 334 IPR003337 GO:0003824|GO:0005992
Bisa05g0330 348 NCBIfam HAD-IIB family hydrolase 78 298 IPR006379 -
Bisa05g0330 348 FunFam Trehalose 6-phosphate phosphatase 177 253 - -
Bisa05g0330 348 FunFam Trehalose 6-phosphate phosphatase 182 340 - -
Bisa05g0330 348 CDD HAD_TPP 77 325 - -
Bisa05g0330 348 Pfam Trehalose-phosphatase 79 323 IPR003337 GO:0003824|GO:0005992
Bisa05g0330 348 SUPERFAMILY HAD-like 77 336 IPR036412 -
Bisa05g0330 348 Coils Coil 215 235 - -
Bisa05g0330 348 Gene3D - 78 319 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0330 Bisa-ChrBisa05 5347486 5349627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0330 74 338 Trehalose Biosynthesis Gene Families AT4G17770 25.899 8.69e-06 45.8