Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0310 ATGATGCTTATCCGGCTTCCGAAATTGATTACGCAGCCTTCCTTCTGGAGATTTGTAGGCATCGATGTTAATTCTGCAAATCAAACAAATGACCGCAATCATCACTACGAATCACACTCACTACGCCAAAGAAAGGTCGTGGCAGGGGTGGAAGTGCCTTCTGATGATGGATACAGTTGGAGAAAATATGGCCAAAAAGAAATTCAAGGAGCCAAGTTTCCGAGAGGGTATTACAGATGCACCCATAGGATTGTTCAAGGATGCTTGGCCACAAAGCAGGTGCTAAGATCTGATGAAGACCCCACCATATTCGAAATCACATACAGGGGAAAGCACACCTGCACAAAGGCGTCCAACGCGGTTCCTCCATCTGGCACACAGGAAAACCAAGAACCACATCCAAGCCCCACAGAAGCTCATCAGCAGAAATCACATGAAGAGCTACTTTCAAACCTGCAGGATGGGCTGCGAGTCCAGACAGAGAATCTAGATGTCCCTGAGTTAGAGTCCTTCTCCAATATGAAAGATGAAAAAGGCCAAGTCTTCACAAGCCCTATGATGGAAATCTTTACTTCTGGGTCCGAGATCTAACATATTCGAGTGAGTCCAGGGATGGAAGTGCCTCCTGATGATGGATACAGTTGGAGAAAATATGGCCAGAAAGACATTCTTCAATCACAGGAAGAGCTACTTTCAAAGCTGCAGGGTATGCTAAGAGTCCAAACAGGGTATCTATATGTCCCTGAGTCAGAGTCCTCCTCCAATATGAAAGATGAAAATAGCCAAGTTTTCACAAGCCCTATGATGGAAATCTTTAGTTCTGGGTCCGAGATCAATAATAATAGCTTGGGTGAGCAGCTTAATTTGGCCACCTCTGGGTCTGAGATCATCTCAACTGTTGCTTTGGCTTCATAG 915 0.4525 MMLIRLPKLITQPSFWRFVGIDVNSANQTNDRNHHYESHSLRQRKVVAGVEVPSDDGYSWRKYGQKEIQGAKFPRGYYRCTHRIVQGCLATKQVLRSDEDPTIFEITYRGKHTCTKASNAVPPSGTQENQEPHPSPTEAHQQKSHEELLSNLQDGLRVQTENLDVPELESFSNMKDEKGQVFTSPMMEIFTSGSEIXHIRVSPGMEVPPDDGYSWRKYGQKDILQSQEELLSKLQGMLRVQTGYLYVPESESSSNMKDENSQVFTSPMMEIFSSGSEINNNSLGEQLNLATSGSEIISTVALAS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0310 304 MobiDBLite consensus disorder prediction 115 137 - -
Bisa05g0310 304 Pfam WRKY DNA -binding domain 210 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g0310 304 Pfam WRKY DNA -binding domain 55 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g0310 304 FunFam WRKY transcription factor 53 41 117 - -
Bisa05g0310 304 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 204 226 IPR044810 GO:0003700
Bisa05g0310 304 SMART WRKY_cls 54 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g0310 304 ProSiteProfiles WRKY domain profile. 55 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g0310 304 MobiDBLite consensus disorder prediction 115 156 - -
Bisa05g0310 304 SUPERFAMILY WRKY DNA-binding domain 208 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g0310 304 SUPERFAMILY WRKY DNA-binding domain 53 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g0310 304 Gene3D WRKY domain 197 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g0310 304 Gene3D WRKY domain 40 109 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0310 Bisa-ChrBisa05 4887082 4893022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0310 181 227 WRKY Transcription Factor Family AT4G23810 46.939 9.18e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa05g0310 WRKY 1.6e-26 CL0274