Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0301 ATGGGCAAGAGAGTGGAGCTCCTGTTGATTTTCTCAGCATCCTTCATGATTGGAGCAATGTTGTTAAGTGTTGATGCTGAGCCCTTGGAAGATAAACAAGCTTTGCTTGATTTCCTTAGTAACACGAGTCTCTCTCATCCTCTAAACTGGGATGGGAATTCTCATGCGTGCAACTGGAGAGGAGTGATCTGCAACAATGAACAATCCAGAGTCATAGCCCTCAGGTTACCCGGAGCTGGATTGAGTGGTCCAATCCCATCCAACACTCTGAGTCGCCTCTCAGCACTTCAAATTCTGAGTCTCAGATCCAATAGTATAACGGGTTCTTTCCCTTCCGATTTCTCTAAGCTTAAAAATTTAACATATCTTTATCTCCAATTCAACAAGTTTTATGGTCCATTACCTATGGATTTCTCTGTTTGGAGTAATCTTCTTGTTGTCAATTTATCCAATAATTCTTTCAATGGAAGCATCCCTTCTTCCATTTCAAAATTGACTCATCTCACATCTTTAGTCCTAGCCAACAACTCGCTTTCCGGGGAGATTCCTAATCTCGATATACAAAGCCTGCGAGAGCTAAATTTAGCCAACAATAACCTCACTGGGATTGTGCCTAAATCCCTCGAGAGATTTCCAGGTTCGGCTTTTGTTGGGAACAACCTGACATCAGAAGATGCACTTCCTCCAGCTTTTCCAGCTCAACCACCAAATGCTGTTTCAACCAAGAAAAGCACACTCAGTGAGCCTGCATTATTGGCTATAATCCTTGGTGGTTGTGTGCTCTTATTTGTGCTGATTGCAGTTTTCATGATTGTGCGCCACTATGAGAAAGGAGATGAACAAGTGCTACCCGCGAAGTCCAAGAAAAAAGAAGGCTCTCTCAATAAAGAAGCATCCGAAACTGAAAATCAAGACAAGAACAAGATTGTGTTCTTTGAGGGTCGCAATCTCGCGTTTGACTTGGAGGACTTGTTGAGATCATCTGCTGAGGTACTAGGAAAGGGGACCTCTGGAACAACATATAAGGCTGCTCTAGATGATGTAACCACAGTGGTGGTTAAGAGGTTGAAGGAAGTCACAGTCGGAAAACGAGAATTTCAACAGCAGATGGAGGCAGTAGGGAGGATCAGGCATGACAACGTGGCTCCACTTAGAGCATACTATTATTCCAAGGAAGAGAAACTCATTGTATATGATCACTACGAACAGGGTAGCATTTCTGCAATGTTGCATGGTAGAAGAGGGGAAGGAAGGAGTTCGTTGGACTGGGATACCCGGCTGAGAATTGCAATAGGTGCAGCAAGAGGCATAGCTCACATCCACACACAACTTGGAGGGAAACTAGTGCATGGAAATGTAAAAGCCTCAAACATCTTCCTCAACTCCCAAGGATATGGTTGTGTATCTGATACAGGTTTGGCGACAATGACGAGTTTATTGGCCTCACCAGCACAGAGAACTGGAGGGTTCCGTGCACCAGAAGTAACAGACATCAGAAAAGCAAGCCAAGCATCTGATGTGTACAGTTTCGGAGTGTTGGTGCTTGAGCTTCTGACGGGGAAATCCTCCATACATGCCAGTGGAAGTGAGGAGGTTGTGCATCTGGTTAGGTGGGTGCATTCTGTGGTGAGAGAGGAGTGGACTGCGGAGGTTTTTGACATTGAGTTACTGAGATATCAAAATATAGAGGAAGAAATGGTCGAGATGTTACAGATAGGGATGGCGTGTGCGGTGAGGATGCCAGAGCGGAGACCAAAAATGCAAGATGTTGTGAGGATGATGGAGGAGATTCGTAAAGTTGATACTGGAACTCAACCATCTACAGAAGCTTCTACCCCAACCCCTTCTGCTATTCACGCTTCCTCTTCCTCTGTTCCACAATGA 1884 0.448 MGKRVELLLIFSASFMIGAMLLSVDAEPLEDKQALLDFLSNTSLSHPLNWDGNSHACNWRGVICNNEQSRVIALRLPGAGLSGPIPSNTLSRLSALQILSLRSNSITGSFPSDFSKLKNLTYLYLQFNKFYGPLPMDFSVWSNLLVVNLSNNSFNGSIPSSISKLTHLTSLVLANNSLSGEIPNLDIQSLRELNLANNNLTGIVPKSLERFPGSAFVGNNLTSEDALPPAFPAQPPNAVSTKKSTLSEPALLAIILGGCVLLFVLIAVFMIVRHYEKGDEQVLPAKSKKKEGSLNKEASETENQDKNKIVFFEGRNLAFDLEDLLRSSAEVLGKGTSGTTYKAALDDVTTVVVKRLKEVTVGKREFQQQMEAVGRIRHDNVAPLRAYYYSKEEKLIVYDHYEQGSISAMLHGRRGEGRSSLDWDTRLRIAIGAARGIAHIHTQLGGKLVHGNVKASNIFLNSQGYGCVSDTGLATMTSLLASPAQRTGGFRAPEVTDIRKASQASDVYSFGVLVLELLTGKSSIHASGSEEVVHLVRWVHSVVREEWTAEVFDIELLRYQNIEEEMVEMLQIGMACAVRMPERRPKMQDVVRMMEEIRKVDTGTQPSTEASTPTPSAIHASSSSVPQ 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0301 627 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Bisa05g0301 627 Pfam Leucine Rich Repeat 189 210 IPR001611 GO:0005515
Bisa05g0301 627 SUPERFAMILY L domain-like 38 211 - -
Bisa05g0301 627 PANTHER OS05G0588300 PROTEIN 14 606 - -
Bisa05g0301 627 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524
Bisa05g0301 627 Gene3D Ribonuclease Inhibitor 29 234 IPR032675 -
Bisa05g0301 627 Pfam Protein tyrosine and serine/threonine kinase 330 593 IPR001245 GO:0004672|GO:0006468
Bisa05g0301 627 ProSiteProfiles Protein kinase domain profile. 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0301 627 FunFam pollen receptor-like kinase 1 295 400 - -
Bisa05g0301 627 Gene3D Phosphorylase Kinase; domain 1 291 400 - -
Bisa05g0301 627 MobiDBLite consensus disorder prediction 598 627 - -
Bisa05g0301 627 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 401 608 - -
Bisa05g0301 627 Pfam Leucine rich repeat 86 130 IPR001611 GO:0005515
Bisa05g0301 627 SUPERFAMILY Protein kinase-like (PK-like) 329 595 IPR011009 -
Bisa05g0301 627 Gene3D Transferase(Phosphotransferase) domain 1 402 613 - -
Bisa05g0301 627 MobiDBLite consensus disorder prediction 601 627 - -
Bisa05g0301 627 ProSiteProfiles Leucine-rich repeat profile. 189 210 IPR001611 GO:0005515
Bisa05g0301 627 FunFam Probable inactive receptor kinase RLK902 29 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0301 Bisa-ChrBisa05 4690877 4692863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0301 20 618 Receptor kinase-like Gene Family AT4G23740 54.936 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa05g0301 PK_Tyr_Ser-Thr 2.3e-28 CL0016