Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0297 ATGCTAACTGCTTCGCTGAAATCTTCTACTTCTGTTATCCAGGCTGAGGTTGATCAGAGAAATGACGATTTACCTCTACGTGCAGTCCCCATCATAAATTACTCAATTCTGATGTGCCCTAGCATACTGGGCACCGCCCTTTGTTTTGTAAAGATGGAAGAGAAGAGGGAGGTGGTGTTGACTAGCGGTGCCACTTTCATGCCTCATGGAAAGTTTGGAGACGACAAAAAACTCAAAATGCAGAGCTTCAGCTTTGACAGGAGATTTGACACCTCGAGTGGTGGAACTGTCATTCGCAAAACAAAATCCTTAAGCGCTCAACTCTTGATCAACATTGACGAACTAATTGATAATTCTGCTGCAAACTATCATAACATAGATTCCAATATTAACCCTTCCTCTGTCAATGAAATAAGATATTCCCTTTCACTCACTGCACCCGCCTTACTCTCACACCAACTCTCAGATGTCTTGAGGCTCCCAAGTCCCAAATGCAAAGATGGTGCACCCACAGTTATTGAGGAGGAACCAGATTTATGTGAGTGGCCAAGATTACAAATGGAACCTACCTTGCCAATATATCTCAAGTTTGAAGATGTGAAATACAAGGTACCAGAAAAAGAGAAGTATATTCTGCATGGGATCACTGGTTCAGTACGGCCAGGGGAGATTCTTGCTCTTATGGGGCCATCAGGAGGTGGGAAAACTACATTACTCAATATCTTGAGTGGAAGGATCAAATTAAACGGTGGTTCCATCACTTATAATGACAAACCATATACCAAGTCATTGAAGCAGAGGATTGGGTATGTGACGCAAGATGATGTTGTGTTCCCTCATCTTACAGTCAAGGAAACTCTCACTTATGCAGCTTTGCTCCGTCTCTCCAAGAATCTATCAAGAACACAGAAAAAAGAGAGGGCCATGAGTGTTTTGAGTGAACTGTGCCTCGAAAGGTGCCAAGATACAATAATTGGTAGCAAATTTATTAGAGGGGTTTCTGGTGGGGAGAGAAAAAGGGTCTGCATTGGCACAGAAATCCTGCTCAATCCATCACTTCTCTTCTTAGATGAACCGACGTCTGGTCTTGATTCAACTACAGCATCACGAATTGTTCAGATTCTTCAAAATATTGCTAAGGAGGGAAAGACAGTGGTGACAACAATACACCAGCCATCAAGTAGACTGTTCAGCATGTTTGACAAGCTGATTCTGTTGGGTAAAGGAAACACCTTGTACTTTGGAAAAGCATCTGATGCAATGATGTATTTCTCCTCCATTGGTTGTTCTCCATTGATAGCCATGAACCCTGCAGAATTCCTCATTGACCTTGCCAATGGCAACATGAATGACAAATCTGTCCCTTCAGAACTTGAGTATAAGTTCCATAGCGGAATCAGAAAACTTGACACAAAAAATGGGACGCCCTCCTCTGTTGATGTCCATGAGTTTCTGGTGGAGTCCTATGAAATAAAACTTGCAGAAAGGGAGAAAACAAGGCTTCTTGAACCTGTGGCATTAAGGGGAGAGAGTGGGATGCAAGGGAGGCCATTCCAGATGGACTTTGGGGCAACTTGGTCTGAACAATTTTGCATTCTCTTCCGAAGAGGCATTAGAGAGAGGCGTTACGAATACTTCGGCTGTGTTCGTGTAACACAAGCAGGACTATTGTTCTTTCTTTCAGTGTTTTGGGGCTTCTATCCTCTATTCAGTGCCGTTTTTATGTTCCCACAAGAAAGAGCGATGCTGGTGAAAGAGAGATCCATTGACATGTACAAACTCAGTGCATACTTCTTAGCGAAAAACACCAGTGATGTTCCACTGGAGTTTATAATGCCTGTAGTGTTCATGGTGATTGTATATTTCATGGTTGGCTTGAAGTTACAATTCTCTGCGTTTTCCCTCACCATGCTCACCGTTTTTCTCAGCGTTCTGGCTGCTCAGGGTCTAGGACAAACCATAAGTGCAGCACTTCTAGATGTGAAGAAAGCAACAACACTAGCCTCAGTCGTTGTTATGACCTTCATGCTCACTGGTGGATTCTTCAGCCAACAAGTCCCAAGGTTCATGTCATGGGTTCGCTACGTCTCTTTCAACTACCACACTTACAGGCTGCTTCTGAAAATTCAGTATGGTTGTTCTGGGTCAATTTCTGCATCAGGTTGCACCGAGTCCCCTTCACTGAAAAACTTTGAGAATAGAGTCGGGGGAGAAATGGAAATCGGATATCATCTTGTGAAGCCAATGCTTCAGAGCAGAAACATTCAGTTTCTGTAG 2277 0.433 MLTASLKSSTSVIQAEVDQRNDDLPLRAVPIINYSILMCPSILGTALCFVKMEEKREVVLTSGATFMPHGKFGDDKKLKMQSFSFDRRFDTSSGGTVIRKTKSLSAQLLINIDELIDNSAANYHNIDSNINPSSVNEIRYSLSLTAPALLSHQLSDVLRLPSPKCKDGAPTVIEEEPDLCEWPRLQMEPTLPIYLKFEDVKYKVPEKEKYILHGITGSVRPGEILALMGPSGGGKTTLLNILSGRIKLNGGSITYNDKPYTKSLKQRIGYVTQDDVVFPHLTVKETLTYAALLRLSKNLSRTQKKERAMSVLSELCLERCQDTIIGSKFIRGVSGGERKRVCIGTEILLNPSLLFLDEPTSGLDSTTASRIVQILQNIAKEGKTVVTTIHQPSSRLFSMFDKLILLGKGNTLYFGKASDAMMYFSSIGCSPLIAMNPAEFLIDLANGNMNDKSVPSELEYKFHSGIRKLDTKNGTPSSVDVHEFLVESYEIKLAEREKTRLLEPVALRGESGMQGRPFQMDFGATWSEQFCILFRRGIRERRYEYFGCVRVTQAGLLFFLSVFWGFYPLFSAVFMFPQERAMLVKERSIDMYKLSAYFLAKNTSDVPLEFIMPVVFMVIVYFMVGLKLQFSAFSLTMLTVFLSVLAAQGLGQTISAALLDVKKATTLASVVVMTFMLTGGFFSQQVPRFMSWVRYVSFNYHTYRLLLKIQYGCSGSISASGCTESPSLKNFENRVGGEMEIGYHLVKPMLQSRNIQFL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0297 758 Pfam ABC-2 type transporter 552 711 IPR013525 GO:0016020|GO:0140359
Bisa05g0297 758 Pfam ABC-2 type transporter 390 453 IPR043926 GO:0140359
Bisa05g0297 758 ProSitePatterns ABC transporters family signature. 333 347 IPR017871 GO:0005524|GO:0016887
Bisa05g0297 758 CDD ABCG_EPDR 192 415 - -
Bisa05g0297 758 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 195 433 IPR003439 GO:0005524
Bisa05g0297 758 Pfam ABC transporter 212 361 IPR003439 GO:0005524
Bisa05g0297 758 Gene3D - 193 426 IPR027417 -
Bisa05g0297 758 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 168 715 - -
Bisa05g0297 758 SMART AAA_5 221 410 IPR003593 GO:0016887
Bisa05g0297 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 440 IPR027417 -
Bisa05g0297 758 FunFam ABC transporter G family member 22 199 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0297 Bisa-ChrBisa05 4639322 4643650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0297 195 394 Calmodulin-binding Proteins AT2G36910 27.670 2.27e-13 72.4