Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0284 ATGGTGGTGCCTAAACTATCATACGAGGAGAGTCGTCGCAAAAGATTGGAGGAGAACAAGAAGAGAATTGAAGCCCTTAATCTCCCTCAACTTTCTCAAGCCCTCAAAAATTCCTCTTCTCCAAAACCCTCTCCTGCCAAGCAGTCCAAATCTCGCTCCATACAGAAACAGATTGTTGTCGTCAGGCGGTCTGGCCGTGTCGCAAACATGCCCGCTCCTATTTACAAAGAAATACTTATTGATCGCGTGGCAATTCCTAGAAGAGTTTATGGTACAAAAAGGAATTTATCAAACCGCGTGTATGCTTCGGAGGAAGCCAGGGAGGAAGCTTTTCAAAAAGCAGAAAAGTTACTCTCGGCTTTAGAATCTGAGTATCCAACCTTTATAAAGTCAATGCTTCAGTCGCATGTTAGCGGGGGATTTTGGTTGGGCCTTCCAGTACAGTTCTGCAAGACTAACCTTCCAAAGCGAGACGAAATGATTACATTGATAGATGAAAATGGGAATGAGTATCCCACAGTATATTTGCCCCGCAAAACTGGACTCAGCGGTGGATGGAAAGGTTTTGCGGTTGCTCATAATTTAGCCGACGGAGACGCATTGGTTTTTCAGTTAATCAGACGTACAGCATTCAAGGTGTACATTATTAGAGTGAGCAGTCCTACTCCTACAAAGGGCAATTAG 684 0.443 MVVPKLSYEESRRKRLEENKKRIEALNLPQLSQALKNSSSPKPSPAKQSKSRSIQKQIVVVRRSGRVANMPAPIYKEILIDRVAIPRRVYGTKRNLSNRVYASEEAREEAFQKAEKLLSALESEYPTFIKSMLQSHVSGGFWLGLPVQFCKTNLPKRDEMITLIDENGNEYPTVYLPRKTGLSGGWKGFAVAHNLADGDALVFQLIRRTAFKVYIIRVSSPTPTKGN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0284 227 MobiDBLite consensus disorder prediction 30 54 - -
Bisa05g0284 227 Gene3D - 102 220 IPR015300 -
Bisa05g0284 227 MobiDBLite consensus disorder prediction 20 54 - -
Bisa05g0284 227 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677
Bisa05g0284 227 SMART B3_2 128 219 IPR003340 GO:0003677
Bisa05g0284 227 Coils Coil 104 124 - -
Bisa05g0284 227 Coils Coil 6 26 - -
Bisa05g0284 227 Pfam B3 DNA binding domain 128 217 IPR003340 GO:0003677
Bisa05g0284 227 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 36 220 IPR044837 -
Bisa05g0284 227 CDD B3_DNA 126 217 IPR003340 GO:0003677
Bisa05g0284 227 SUPERFAMILY DNA-binding pseudobarrel domain 121 219 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0284 Bisa-ChrBisa05 4539002 4540402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0284 1 220 B3 DNA Binding Superfamily AT3G19184 55.357 1.68e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa05g0284 B3 5.9e-17 CL0405