Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0276 ATGTTAATACTTGGAGGTTTAGAGCAGCAATTCGAACTTTGGCATGTGGAGATTACTATTGAAAACCAAACCAGAAGGGGTGAGAATGGAAGAGAGAGAGAGTTTGGAGGGAGAGCAGCCATTGGAGAAGGAAGAGTTGCATGCTTCAGAGGGAGAGCACCTGTTGTGAGCAGATTCTCATCAAGAGGACCAGACATCATTGACATTAATAACAATCTTGCTGATGTGCTTAAACCTCATGTTCTTGCTCCTGGCCACCAAATTTGGGCTGCTTGGAGCCCCATCAGTGCCTTACAACCTTTGCTCCCAGGAATTGCAGCGCTTATAAAGCAATATAATCCATCATGGACTCCATCCATGATAGCATCTGCAATCCCCACAATCTCCACAAAGTATGACAACTTTGGAGAGCATATAATGGCAGAAGGATCTGAGATCAATAGCTTGTATCCCTCCACTCCTTTTGATTATGGAGCTGGCATGATTAACCCTAACTCTGCCATTGATCCTGGATTGGTCCTAACATCAGATTTACAACTGACGACGGGAGAAGAAAAGATAGAAAGCATACTGAGAGAAGCAGATAAGAGTGGAGATGGTGTTTTGAACAAAAAGGAGCTGGAAGACGCCTTCCGCAAACTAGGCTCGAGGCTTCCATGGTGGAGAGCCTTACGATGTTTCAACGTTGCAGACTCCAACAACGACGGAGTCATCAGCGAAAACGAATTGAAGGAACTCATCAAGTACTGCAGGAGTAAGTATGGCTTCAAGTAA 774 0.4483 MLILGGLEQQFELWHVEITIENQTRRGENGREREFGGRAAIGEGRVACFRGRAPVVSRFSSRGPDIIDINNNLADVLKPHVLAPGHQIWAAWSPISALQPLLPGIAALIKQYNPSWTPSMIASAIPTISTKYDNFGEHIMAEGSEINSLYPSTPFDYGAGMINPNSAIDPGLVLTSDLQLTTGEEKIESILREADKSGDGVLNKKELEDAFRKLGSRLPWWRALRCFNVADSNNDGVISENELKELIKYCRSKYGFK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0276 257 SMART efh_1 222 250 IPR002048 GO:0005509
Bisa05g0276 257 SMART efh_1 186 214 IPR002048 GO:0005509
Bisa05g0276 257 SUPERFAMILY Subtilisin-like 53 172 IPR036852 GO:0004252|GO:0006508
Bisa05g0276 257 ProSitePatterns EF-hand calcium-binding domain. 195 207 IPR018247 -
Bisa05g0276 257 ProSiteProfiles EF-hand calcium-binding domain profile. 182 217 IPR002048 GO:0005509
Bisa05g0276 257 CDD EFh 186 248 IPR002048 GO:0005509
Bisa05g0276 257 Gene3D - 176 253 - -
Bisa05g0276 257 SUPERFAMILY EF-hand 182 249 IPR011992 -
Bisa05g0276 257 Gene3D Peptidase S8/S53 domain 50 175 IPR036852 GO:0004252|GO:0006508
Bisa05g0276 257 Pfam EF hand 226 246 IPR002048 GO:0005509
Bisa05g0276 257 ProSiteProfiles Serine proteases, subtilase domain profile. 1 168 - -
Bisa05g0276 257 ProSitePatterns EF-hand calcium-binding domain. 231 243 IPR018247 -
Bisa05g0276 257 ProSiteProfiles EF-hand calcium-binding domain profile. 225 253 IPR002048 GO:0005509
Bisa05g0276 257 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 50 175 IPR045051 -
Bisa05g0276 257 Pfam EF-hand domain pair 177 207 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0276 Bisa-ChrBisa05 4374086 4379121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0276 21 179 Subtilisin-like Serine Gene Family AT1G62340 53.107 2.23e-51 177