Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0242 ATGAACAGTGAAGACCTGTTAAAGTCGACATCCTCTTCGGAGGAGGATCAAATGGACATGATGATGAAGACGATGATGCAACTCCCCGAATTCTCCGGAGCCTACAGCAACGAGGTCGTCCCGGACTTGCCACCGCCTGAGCTCTCTGCTTCGGCCGCCGCCAGGACAACCATCGACATACACGGTGACGGTGGCACCATGCCACATTTCGTCAACGACAACCCTGCGATGCCTAATTCGTCCTTGTTCGAAAACTTGCAATCTAATAACACAATTTCCTTCACGAACCCTACCCCCAATTTTGAAGAGCAAGGTGCATCGGCATCCTACGGGAGAGGAATAGAGAAGGGGATATCGATGGCGGCGATGAGGGAGATGATATTCCGGATAGCGGCGATGCAGCCGATTCACATAGACCCGGAGTCGGTGAAGCCGCCGAAGCGGAGGAACGTGAAGATCTCGAAGGATCCTCAGAGCGTGGCGGCTCGGCACCGGAGAGAGAGGATAAGCGAGAGGATAAGGATACTGCAGAGGCTGGTGCCGGGAGGGACGAAGATGGACACGGCTTCCATGTTAGACGAAGCCATTCACTACGTGAAGTTCCTCAAGACCCAGGTCCAGTCACTCGAACGCGCTGCCGCCATTAGGCCTCCCGGGACGGGATTCCCTGTGGCCATGTCTACCGGGACTCACACGTCCTATTGTCTTCCACACCCTAAACCTCCAAATGTGAACCCTTACGGAGACGCTTAA 753 0.5485 MNSEDLLKSTSSSEEDQMDMMMKTMMQLPEFSGAYSNEVVPDLPPPELSASAAARTTIDIHGDGGTMPHFVNDNPAMPNSSLFENLQSNNTISFTNPTPNFEEQGASASYGRGIEKGISMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAIRPPGTGFPVAMSTGTHTSYCLPHPKPPNVNPYGDA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0242 250 Gene3D - 152 216 IPR036638 GO:0046983
Bisa05g0242 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Bisa05g0242 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 212 IPR036638 GO:0046983
Bisa05g0242 250 FunFam BHLH transcription factor 156 218 - -
Bisa05g0242 250 CDD bHLH_AtIND_like 154 210 - -
Bisa05g0242 250 SMART finulus 159 208 IPR011598 GO:0046983
Bisa05g0242 250 Pfam Helix-loop-helix DNA-binding domain 163 202 IPR011598 GO:0046983
Bisa05g0242 250 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 56 228 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0242 Bisa-ChrBisa05 3829506 3830258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0242 113 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 84.112 1.21e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa05g0242 HLH 1.6e-06 No_clan