Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0241 ATGGCTCTTCTGCTAGACAACTGTGAGGGCATTTTACTGTCTCTGGACTCACACAAATCGGTGCCGGCTCCTTTCCTCACCAAGACGTACCAACTGGTGGACGATCCCGCCACCGACCATATAGTGTCATGGGGTGAAGACGACACCACTTTCATCGTTTGGCGACCCCCTGAGTTCGCTAGGGATCTCCTGCCCAACTACTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAGCTCAACACCTATGGTTTTAGGAAGATCGTGCCGGACAGATGGGAGTTCGCGAACGAGTTCTTCAAGAAGGGAGAGAAGCACTTGTTGTGCGAGATCCACAGAAGGAAGACAGCTCAGCCTCATCATCCTCATCATCAGCAGCAGGTGCCCACCAATATTCATCATCATCATCATCATCCTCATCATCCGCTGGGACTCAACGTCCCCTCTTTCTTCCCTTTCTCCAGCGCCAGAATCAGCATCTCTCCTCCCAACGACTCCGACGACCAACCGCCCAACTGGTGCGACTCTCCGCCCCTCACTTCTCCCCGTGGAGGAGGCGCCGCCGTTTCCTCCGTCGTCACTGCTGCTAACTACAACACCACTTCCGTCACCGCGCTGTCGGAGGACAACGAGAGGCTCAGGCGAAACAACACCATGCTCGTGTCTGAGCTGGCACACATGAAGAAGCTTTATAACGACATCATCTACTTCGTTCAGAACCATGTCAAGCCTGTGGCTCCCAGCAATTCTTACCACTCTTCTTCTTCTTTGCTCCTATCCAACCCACCCCCTCCCTCTTCCTCAGTGGTGCAGAGGCCCATGAACCAACTTCTGGGGTATTACTCCGCTTTTACGAACCCCAAGCAAGCAATACCACATCTTGTGACGAGTACGGCCTCTCCCACCAACACATCCAAAAGCTCCGTCACCATTGTGGAAGACATGAGTACCAACCGCTGCGGCAAGACCAAGCTTTTTGGTGTGTCACTTCAGTCCAAGAAGAGGGTGCATCCTGACTCTGATGCTGATTCTATTACTCCCACTACCAATTCTGACACCAACAAGGCTCGATTTGTCTTGGAAAAGGATGACTTGGGCTTGAATCTCATGCCTCCTTCTGCTTCTTAA 1128 0.5248 MALLLDNCEGILLSLDSHKSVPAPFLTKTYQLVDDPATDHIVSWGEDDTTFIVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPHHPHHQQQVPTNIHHHHHHPHHPLGLNVPSFFPFSSARISISPPNDSDDQPPNWCDSPPLTSPRGGGAAVSSVVTAANYNTTSVTALSEDNERLRRNNTMLVSELAHMKKLYNDIIYFVQNHVKPVAPSNSYHSSSSLLLSNPPPPSSSVVQRPMNQLLGYYSAFTNPKQAIPHLVTSTASPTNTSKSSVTIVEDMSTNRCGKTKLFGVSLQSKKRVHPDSDADSITPTTNSDTNKARFVLEKDDLGLNLMPPSAS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0241 375 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Bisa05g0241 375 MobiDBLite consensus disorder prediction 116 141 - -
Bisa05g0241 375 Gene3D - 17 116 IPR036388 -
Bisa05g0241 375 MobiDBLite consensus disorder prediction 336 355 - -
Bisa05g0241 375 FunFam Heat stress transcription factor B-4 17 115 - -
Bisa05g0241 375 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa05g0241 375 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa05g0241 375 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa05g0241 375 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa05g0241 375 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 282 IPR027725 -
Bisa05g0241 375 MobiDBLite consensus disorder prediction 161 187 - -
Bisa05g0241 375 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa05g0241 375 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa05g0241 375 MobiDBLite consensus disorder prediction 115 141 - -
Bisa05g0241 375 MobiDBLite consensus disorder prediction 249 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0241 Bisa-ChrBisa05 3811585 3812840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0241 1 373 HSF AT1G46264 55.471 7.26e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa05g0241 HSF_DNA-bind 4e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0241 05 3811585 3812840 Bisa09g1871 09 29298790 29299957 CCT
Bisa05g0241 05 3811585 3812840 Bisa05g0241 05 3811585 3812840 ECH