Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0236 ATGCCCTCTGATTCCGACGATTTCTCCGCCATCTTCACCCACCTCCTCCACACCTCACCCTCCAAACCCAAAACCTTACCGCCGCCGTGGGGGACCACCGGTTTTTTCCATTCCGGGGACACTCACAGGCTTGCCCAATTGGGCTCGGATTCTGGGCTGGACCACCCGCTCAAAAATGGAAAGTCGGTTGGTTCTTCAGACGCTCTTGCTGTTGCTTCCTCTGGTTTCGATTTTTCTGATCCCTATGCTTACGTTCCGGCTGATTTGAAAGAGGCTACTGGAAACGAGCTTTTCCCAACTGGTGTCGACGACTCTGATGAAAACACCTCCTTCAAGGAACATAGGATTTCGCCGGAGAATGATGCCGGTGATTTCACTTCTCCAGTCGAGAAGAATACTGAGGCGTCAAGGACAAAGCAAATTCCGTCTCGAAGTTCGTCAAAGAGGAGTAGAGCTGCAGAGAGACGGAGGAGTAGGATTAACGAGAAAATGAAGGCCTTACAGAACTTAATTCCAAATTCTAACAAGACGGATAAAGCTTCAATGCTAGACGAGGCGATTGAGTATTTGAAGCAGCTTCAGCTGCAGGTGCAAATGTTAATGATGAGAAATGGTTTGAGCTTGCATCCAATGTGTTTACCAGGAGGACTGCAACCCATGACACTTCCTCAGACTCGGTTGAATTTTGATGAGGCTAATGCTGAAAGCTTCTTGCAGCCGGACTTTACTCTTCCAAAGCATTGCCTTATCTCGGATAAGCCGGCGATCATACCCTCAATGCCAAACACGGCCAATCCAGATACCTCATCCAGTTTCAAGTTTCATGTTGGACATTTTGATCCGTCAACACCATCCAAGGATGCACTCTGTGATGGCACACTGCAGCTTCATTTGGATGCCAGAAAGATTGAAGAGAACCCCTCTTCAGATGTGTCTTAA 939 0.4814 MPSDSDDFSAIFTHLLHTSPSKPKTLPPPWGTTGFFHSGDTHRLAQLGSDSGLDHPLKNGKSVGSSDALAVASSGFDFSDPYAYVPADLKEATGNELFPTGVDDSDENTSFKEHRISPENDAGDFTSPVEKNTEASRTKQIPSRSSSKRSRAAERRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMMRNGLSLHPMCLPGGLQPMTLPQTRLNFDEANAESFLQPDFTLPKHCLISDKPAIIPSMPNTANPDTSSSFKFHVGHFDPSTPSKDALCDGTLQLHLDARKIEENPSSDVS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0236 312 SMART finulus 151 199 IPR011598 GO:0046983
Bisa05g0236 312 MobiDBLite consensus disorder prediction 95 158 - -
Bisa05g0236 312 MobiDBLite consensus disorder prediction 126 147 - -
Bisa05g0236 312 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Bisa05g0236 312 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 86 276 IPR031066 -
Bisa05g0236 312 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 204 IPR036638 GO:0046983
Bisa05g0236 312 Gene3D - 143 209 IPR036638 GO:0046983
Bisa05g0236 312 Pfam Helix-loop-helix DNA-binding domain 155 194 IPR011598 GO:0046983
Bisa05g0236 312 Coils Coil 150 170 - -
Bisa05g0236 312 CDD bHLH_AtPIF_like 160 206 IPR047265 -
Bisa05g0236 312 MobiDBLite consensus disorder prediction 106 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0236 Bisa-ChrBisa05 3646362 3648668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0236 144 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 73.810 1.13e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa05g0236 HLH 1.9e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0236 05 3646362 3648668 Bisa05g0236 05 3646362 3648668 ECH