Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0233 ATGGGAGAGCCTCGCTCTCAGTGCGGGTCACTCCCACCCGGTTGCCGATTCTACCCTTCCGAAGAGCAGCTCCTCTGCTACTATTTGACTAACAAAAACTCCATTGCGAACGAGGATGGTGATTTTTGTGGATGCAATGTGATCAGAGAGATTGACCTCTACGATCACGATCCTTTCGAATTGCCTGACGTCGCGTCGTTTTCCTATGGTTACCGGGGAAGAAAGAGGCATTGGTACTGTTATACGGACAGGGCGGTGAAGGGGACCCGACGGAAGAGGAGGAAGGTCAAAAGTGGATTTTGGATGAGACAGGGAAAGGTTAGAGATGTTTTGAGTGGTGGTGGGAAGGTGGTGTTGGGCACGAGGACGAGTTTCGTGTTCTATTTGGGGAATTCGTCGGAGGATGCAGTCAAGACGGATTGGATGTTATATGAATATGCATTACTTAATCATCTCAAGGCTTCTTTTGTCCTTTGTCGTGTATTTGCTAGGCCTTGTAGGAATAGTGCATCAGAGATTGGCCCAAGTTCTTGGGCAGAAGAAAGTGTGTCAGCGGTACATCACATTGGCATTCAGCATGATGGATTTGTTACACCTGATGTTGTTGAAGCTACAGTATGTGATGACAGGTCTGTTGACAGAAAAGAGGAGATTTCAGTGTATCCACTGAGATATATTGACGGGCCAGATGACCAACAGGTCCTGACTGCGCCTGTTTCTGCTGCTACTTTCCAACGTTCTGTGAGTCCTCAAGGTAGTCAGCAGGGCATGGTAAGTACGAGAATGGAAGGAAGGGTAGATGGTATAGAACAAGAGTTGGGTTCGTTAAGGGGAGAAGTGGCAGCAGTGAAGACAGATATCAACCAAATAAAAATTATTATGATGGAGTTGCAAGAATCTATGTCCAGACTTGAGAATAGAAGGAAGGAGGTGGAAGGGGCACCTGACAGGGAACAATCAGAGTCTAACGCATGCGACAATAGGGAGGCATTGGAGAGGGAGAGAGACGCAAGCAAATATAGGAAACTAGAGATACCCGTCTTTGAGGGCGATGACCCAATCGGCTGGCTATTCCGAGTCGAACTATACTTCCATATTAATGGCGTGGCAGACGCTGAAAGACTAGAGGCGGCGGCCGTGTGCATGGAGGGTTGA 1155 0.4797 MGEPRSQCGSLPPGCRFYPSEEQLLCYYLTNKNSIANEDGDFCGCNVIREIDLYDHDPFELPDVASFSYGYRGRKRHWYCYTDRAVKGTRRKRRKVKSGFWMRQGKVRDVLSGGGKVVLGTRTSFVFYLGNSSEDAVKTDWMLYEYALLNHLKASFVLCRVFARPCRNSASEIGPSSWAEESVSAVHHIGIQHDGFVTPDVVEATVCDDRSVDRKEEISVYPLRYIDGPDDQQVLTAPVSAATFQRSVSPQGSQQGMVSTRMEGRVDGIEQELGSLRGEVAAVKTDINQIKIIMMELQESMSRLENRRKEVEGAPDREQSESNACDNREALERERDASKYRKLEIPVFEGDDPIGWLFRVELYFHINGVADAERLEAAAVCMEG 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0233 384 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 267 - -
Bisa05g0233 384 Coils Coil 287 314 - -
Bisa05g0233 384 Gene3D NAC domain 20 167 IPR036093 GO:0003677|GO:0006355
Bisa05g0233 384 MobiDBLite consensus disorder prediction 306 331 - -
Bisa05g0233 384 Pfam No apical meristem (NAM) protein 12 148 IPR003441 GO:0003677|GO:0006355
Bisa05g0233 384 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Bisa05g0233 384 ProSiteProfiles NAC domain profile. 11 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0233 Bisa-ChrBisa05 3593038 3595948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0233 2 164 NAC Transcription Factor Family AT1G76420 36.257 1.07e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa05g0233 NAM 7.5e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0233 05 3593038 3595948 Bisa05g0233 05 3593038 3595948 ECH