Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0226 ATGAATTCCCCTACCGTTCGACGCGTCTCCGAGTGCTTCATCAAGCCATCCTTCCCTCCCTATGATTCCAACCCCATCTGCTATCTCAATCAATGGGATCTCGCCTTTCTCTCCACACACTACATCCAGAAGGGTCTCCTCTTCCACAAGCCTCCTCATCCCTATTCCATTCCCACTCTTCTACACCGCCTCAAGCACTCCCTCTCTCTCACCCTCTTCCACTTCTACCCCCTCGTCGGCCGCCTCCTCACCCACCACACCCACCACCCTCCCTCCTACACCGTCTTTGTTGACAGAAAGAGCGGCGACGGAGCTAGATTTATCTACGCCACTCTAGATATGGCCATCTCCGACATCCTCTCTCCCGTAGACGTCCCCGCCCTTGTCCAGTCGTTCTTCGACCATGACAGAGCAGTCAACCATGATGGCCACACCTTGCCTTTGCTCTCCATTCAGGTCACCGAACTAATGGACGGCGTTTTCATAGGGTGCTCCATGAACCATTGCCTCGCCGATGGAACTTCCTACTGGAAGTTCTTCAATACTTGGTCTGAAATCTTTAAATCACTGGGAGATAAATACGACGACGTTGATGGTGTTGATGGCATTCGGACTGCGATCTCTCTCCAACTTATTCACAATCGGTGGTTCCCTGAGGGTTGTGGTCCTTTAATCAACCTTCCCTTCAAGCATCACGACGAGTTCGTGAGCAGATTCGAGGCTCCCTCTCTAAGAGAGAGAATATTTCACTTCACATCTGAGAGTCTCGCGAAGCTCAAAGCAAAGGCAAACCACGAGGCCAACACCACCAAAATATCGTCGTTCCAATCCCTATCCGCACTCGTCTGGAGGTGCATAACAAGAGCGCGACATTTACCGCGTGACCAGACCACGAGATGCAAGTTGGCCGCAAGTAACAGAACAAGAATGGTACCGAACTTACCGGAAGAGTATTTCGGGAACTCGATTCACGTGGTGGACGCCGAGACGACGTCGGAGGAGTTGTTAAGGCAGGACCTGGGTTGGGCAGCGTGGAGGGTGCACATGGCGGTTGCGAGCCACAACAACCAGGTGGTGCACGAGTACTTGAAAAAGTGGTTGGAGAGTCCGAGTATGTATCAGATTGGTCGATTATATGACCCGACTACCGTGATGATGGGAAGCTCGCCCAGGTTCAACATGTACGGCAATGAGTTTGGGATGGGAAAAGCGATTTGTGTTCGAAGTGGGTATGCTAACAAGTTTGATGGCAAAGTGACGTCGTATCCGGGTCATGAAGGAGGGGGAAGCATAGATCTGGAAATGTGTCTCTTGCCGAAATACATGAAGGCTCTAGAAACAGATGAGGAGTTCATGAATTCAGTCTCTCTCTAG 1374 0.5131 MNSPTVRRVSECFIKPSFPPYDSNPICYLNQWDLAFLSTHYIQKGLLFHKPPHPYSIPTLLHRLKHSLSLTLFHFYPLVGRLLTHHTHHPPSYTVFVDRKSGDGARFIYATLDMAISDILSPVDVPALVQSFFDHDRAVNHDGHTLPLLSIQVTELMDGVFIGCSMNHCLADGTSYWKFFNTWSEIFKSLGDKYDDVDGVDGIRTAISLQLIHNRWFPEGCGPLINLPFKHHDEFVSRFEAPSLRERIFHFTSESLAKLKAKANHEANTTKISSFQSLSALVWRCITRARHLPRDQTTRCKLAASNRTRMVPNLPEEYFGNSIHVVDAETTSEELLRQDLGWAAWRVHMAVASHNNQVVHEYLKKWLESPSMYQIGRLYDPTTVMMGSSPRFNMYGNEFGMGKAICVRSGYANKFDGKVTSYPGHEGGGSIDLEMCLLPKYMKALETDEEFMNSVSL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0226 457 Pfam Transferase family 12 452 - -
Bisa05g0226 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 453 - -
Bisa05g0226 457 Gene3D - 231 447 IPR023213 -
Bisa05g0226 457 FunFam Tryptamine hydroxycinnamoyl transferase 230 448 - -
Bisa05g0226 457 Gene3D - 8 218 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0226 Bisa-ChrBisa05 3430964 3432337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0226 64 446 Monolignol Biosynthesis Gene Families AT5G48930 28.040 1.19e-33 129