Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0225 ATGAATTCCCCTGCCGTCCGACGCGTCTCCGAGTGCTTTATCAAGCCAACCTTCCCTCCCTATGATTCCAACCCCATATGCTATCTCAATCAATGGGATCTCGCCTTTCTCTCCACACACTACATCCAAAAGGGTCTCCTCTTCCACAAGCCTCCTCATCCCTATTCCATTCCCACTCTTCTACACCGCCTCAAGCACTCCCTCTCTCTCGCCCTCTTTCACTTCTACCCCCTCGCCGGTTGCCTCCTCACCCACCACACCCACCACCCTCCCTCCTACACCGTCTTTGTTGACAGAAAGAGCGGCGACGGAGCTAGATTTATCTACGCTACTCTAGATATGGCCATCTCCGACATCCTCTCTCCCGTAGACGTCCCCGCCGTTGTCCAGTCATTCTTCGACCATGACAGAGCAGTCAACCATGATGGCCACACCTTGCCTTTGCTCTCCATTCAGGTCACCGAACTAATGGACGGCGTTTTCATAGGGTGCTCCATGAACCATTGCCTCGCCGATGGAACTTCCTACTGGAAGTTCTTCAATACTTGGTCTGAAATCTTTAAATCACTGGGAGATAAATACGACGACGTTGATGATGTTGATGGCATTCACACTCCGATCTCTCTCCAACTTATTCACAATCGGTGGTTCCCTGAGGGTTGTGGTCCTTTAATCAACCTTCCCTTCAAGCATCACGACGAGTTCGTGAGCAGATTCGAGGCTCCCCCTCTGAGAGAGAGAATATTTCACCTCACATCTGAGAGTCTCGCGAAGCTCAAAGCAAAGGCAAACCACGAGGCCAACACGGCCATAATATCGTCATTCCAATCCCTATCCGCACTCGTCTGGAGGTGCATAACACGCGCACGACGTTTACTGCATGACCAGACCACGAGATGCAAGTTGGCCGCAAGTAACAGAATAAGAATGGTACCGAATTTACCGGAAGAGTACTTCGGGAACTCGATTCACTTGGTGGACGCCGAAACGACGTCGGAGGAGTTGTTAAGGCAGGACCTGGGTTGGGCGGCGTGGAGGGTGCACGTGGCGGTTGCTAGCCTCAACGACCAGGTGGTGCGTGAGTACTTGAAAAAGTGGTTGGAGAGTCCGACTTTAAATCAGATTGGTCGATTCGCTGACTCGAACACAGTGATGATAAGCAGCTCGCCCAGGTTCAACATGTACGGGAACGAGTTTGGGATGGGAAAACCGATGTGTGTTCGAAGTGGGTACAATAACAAGTTTGATGGCAAAGTGACGTCGTATCCGGGTCGTGAAGGAGGGGGAAGCATAGATTTGGAAATGTGCCTCTCGCCGGAATACATGAAGGCGCTAGAAACAGACGAGGAGTTCATGAATTCAGTCTCTCTCTAG 1374 0.5138 MNSPAVRRVSECFIKPTFPPYDSNPICYLNQWDLAFLSTHYIQKGLLFHKPPHPYSIPTLLHRLKHSLSLALFHFYPLAGCLLTHHTHHPPSYTVFVDRKSGDGARFIYATLDMAISDILSPVDVPAVVQSFFDHDRAVNHDGHTLPLLSIQVTELMDGVFIGCSMNHCLADGTSYWKFFNTWSEIFKSLGDKYDDVDDVDGIHTPISLQLIHNRWFPEGCGPLINLPFKHHDEFVSRFEAPPLRERIFHLTSESLAKLKAKANHEANTAIISSFQSLSALVWRCITRARRLLHDQTTRCKLAASNRIRMVPNLPEEYFGNSIHLVDAETTSEELLRQDLGWAAWRVHVAVASLNDQVVREYLKKWLESPTLNQIGRFADSNTVMISSSPRFNMYGNEFGMGKPMCVRSGYNNKFDGKVTSYPGREGGGSIDLEMCLSPEYMKALETDEEFMNSVSL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0225 457 FunFam Tryptamine hydroxycinnamoyl transferase 230 448 - -
Bisa05g0225 457 Gene3D - 8 220 IPR023213 -
Bisa05g0225 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 453 - -
Bisa05g0225 457 Gene3D - 231 447 IPR023213 -
Bisa05g0225 457 Pfam Transferase family 28 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0225 Bisa-ChrBisa05 3426705 3428078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0225 64 446 Monolignol Biosynthesis Gene Families AT5G48930 29.126 1.75e-35 134