Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0220 ATGGTCAGCATGAAGGTGCATCACTTGGCTCGTGGACTCTGGGAGCACGAACCCTCCCTCTCCCTCAGCTGCAAACGCCTCCGCCCTCTCGCCCCCAAGCTCCCCTCCCACTCCCACTCTTTCGACCTCAAGACCTTCATACGACCCGAAAGCACCCCCATCATTAATACCAAGAAAGACCCACCCCAGGTGGAGACGCATCCAGGGGGGACGAGGTGGAATCCCACGCAGGAGCAGATTGGTATATTGGAGATGCTGTACAGAGGAGGCATGAGGACTCCCAACGCTCAACAGATAGAGCAGATCACGGCTCAGCTTGGAAAGTATGGCAAGATCGAAGGCAAGAATGTGTTCTATTGGTTCCAGAATCACAAGGCACGCGAGAGGCAGAAGCAGAAGCGTAACAGTCTTGGCCTTTCTCATACCCCCAGAACACCACACTCTCAATATTCTTCCACTCTTTCCAGTACTCCCATCACTTTGGACAACCCCACGGGGGAAGTAGTAGAAGCAGAGGAAGACAGTCCGAACAAGAAGAAGTGTAGGAGCTGGGGATTTGAGGGTTTCCAAGAACAAAGCAAGTCGTGTAAAGAGGAGGAATATAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGTAGATGA 645 0.5271 MVSMKVHHLARGLWEHEPSLSLSCKRLRPLAPKLPSHSHSFDLKTFIRPESTPIINTKKDPPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHTPRTPHSQYSSTLSSTPITLDNPTGEVVEAEEDSPNKKKCRSWGFEGFQEQSKSCKEEEYRTLELFPLHPEGR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0220 214 SMART HOX_1 68 135 IPR001356 GO:0003677
Bisa05g0220 214 SUPERFAMILY Homeodomain-like 66 136 IPR009057 -
Bisa05g0220 214 CDD homeodomain 71 132 IPR001356 GO:0003677
Bisa05g0220 214 Gene3D - 70 137 - -
Bisa05g0220 214 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 214 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Bisa05g0220 214 ProSiteProfiles 'Homeobox' domain profile. 66 131 IPR001356 GO:0003677
Bisa05g0220 214 MobiDBLite consensus disorder prediction 126 195 - -
Bisa05g0220 214 Pfam Homeodomain 71 130 IPR001356 GO:0003677
Bisa05g0220 214 MobiDBLite consensus disorder prediction 136 163 - -
Bisa05g0220 214 MobiDBLite consensus disorder prediction 171 185 - -
Bisa05g0220 214 MobiDBLite consensus disorder prediction 53 75 - -
Bisa05g0220 214 FunFam WUSCHEL-related homeobox 4 70 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0220 Bisa-ChrBisa05 3313014 3313874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0220 4 137 Wox Gene Family AT1G46480 68.387 9.68e-66 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bisa05g0220 Homeodomain 4.6e-19 CL0123