Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0218 ATGGAAGACAGGGATTGTTGTTCGACGAATTCGACGATCACCACATCAAGCAGAAGGAGTCCGGAGAAGCGGAAGCACCAACAAGAAGCAGGGAAGGAGAAAGAGAAGCCGTACAGAGGCATAAGGATGAGGAAGTGGGGCAAGTGGGTGGCTGAGATCAGAGAGCCCAATAAGAGATCGAGGATTTGGCTGGGGTCTTACACCACTCCGGTGGCCGCCGCACGCGCATACGACACCGCCGTTTTCTACCTTCGAGGCCCCTCCGCTCGCCTCAACTTCCCCGAGCTCTTGCTCCAAGAAAACGACGGTAGTTTAGCGCAAGGCGACATCTCCGCCGACTCCATACGCAAGAAAGCAACCGAAGTCGGTGCAAGAGTCGACGCTCTCCAAACCGCTCTTCACGCCGCCTCCCACTCCGCTTCCTCACAACCCGCCTTCCACAAACCCGACTTGAACGAGTATCCACAACCCGAAGACTCCGTGGAGGATTAG 492 0.565 MEDRDCCSTNSTITTSSRRSPEKRKHQQEAGKEKEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLLQENDGSLAQGDISADSIRKKATEVGARVDALQTALHAASHSASSQPAFHKPDLNEYPQPEDSVED 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0218 163 CDD AP2 38 96 IPR001471 GO:0003700|GO:0006355
Bisa05g0218 163 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Bisa05g0218 163 MobiDBLite consensus disorder prediction 1 37 - -
Bisa05g0218 163 SUPERFAMILY DNA-binding domain 37 95 IPR016177 GO:0003677
Bisa05g0218 163 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 19 160 - -
Bisa05g0218 163 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Bisa05g0218 163 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
Bisa05g0218 163 Pfam AP2 domain 38 86 IPR001471 GO:0003700|GO:0006355
Bisa05g0218 163 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Bisa05g0218 163 PRINTS Ethylene responsive element binding protein signature 76 96 IPR001471 GO:0003700|GO:0006355
Bisa05g0218 163 MobiDBLite consensus disorder prediction 18 37 - -
Bisa05g0218 163 MobiDBLite consensus disorder prediction 134 163 - -
Bisa05g0218 163 FunFam Ethylene-responsive transcription factor 2 36 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0218 Bisa-ChrBisa05 3284328 3284819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0218 32 163 AP2-EREBP Transcription Factor Family AT2G23340 59.184 5.52e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa05g0218 AP2 2.6e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0218 05 3284328 3284819 Bisa05g0218 05 3284328 3284819 ECH