Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0210 ATGGCTGTGGAGCTTATATCGGGTTATGGGGATCATAGTTTTGCAGGGAGGACGTCGGAAGACAACACAACTGCGGTGCAGGAAGCTGCCGCCGCCGGCATTCACAGCGTCGAGAAACTCATGACCATGATTTCTCAGCAACAGCACCCCCAAGGGCCGTCGGAGTTGGAAGCTGTTGCCGATGTGGCAATGAACAAATTCAAAAGGGTAATCTCGCTGCTGGATAGGCCAAGAACTGGTCACGCTCGTTTCAGAAAAGCCCCCACAAAGCTTCCATCTGTTCCTCTTCCCCAATTACAACAGACTCCGGATTCTGAAACCAAAAGGCCTGTTCTCACAGAACAAGCCTCTGCGTTCAAGGTGTATTGTCCCACCCCTGTTTTGCGACTCCCGCCTCTGCCTCACCAGGTGCATCAACCCTTCCCCTTCCAACGGCTGGAGAAGAAGGAATCAAGTGGTGGTCTCCGAGTTTCACTTTCAGAGACCAATTCGTATATCTCTGCTTTAACAGGGGACACTGAAATCACCCATGGCTCACAGCAAGGGTCCTATATCGGCAAGCCACCTCTGTGTTCAAGTTCTTTAAAGAGGAAGTGCAATTCAATGGACGATGCAGCTGCTCTCAAGTGCAGATCAACCTCCGGACGCTGCCATTGCTCCAAGAAAAGGAAATCAAAGATAAAGAGAGTCATCAGAGTGCCAGCAATCAGCTCCAAGATGGCTGATATTCCGGCCGATGACTATTCCTGGAGAAAATATGGACAGAAGCCCATCAAGGGTTCTCCTCACCCCAGGGGGTATTACAAATGTAGCAGCGTGAGAGGGTGCCCAGCACGTAAACACGTGGAGCGAGCTGTTGACGATCCCACCATGCTCATCGTCACCTACGAAGCTGATCATAATCACCCCCGCGAGGTTGCACCGCCCGTCGTCCTTCAATCATCCTAG 948 0.5169 MAVELISGYGDHSFAGRTSEDNTTAVQEAAAAGIHSVEKLMTMISQQQHPQGPSELEAVADVAMNKFKRVISLLDRPRTGHARFRKAPTKLPSVPLPQLQQTPDSETKRPVLTEQASAFKVYCPTPVLRLPPLPHQVHQPFPFQRLEKKESSGGLRVSLSETNSYISALTGDTEITHGSQQGSYIGKPPLCSSSLKRKCNSMDDAAALKCRSTSGRCHCSKKRKSKIKRVIRVPAISSKMADIPADDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPTMLIVTYEADHNHPREVAPPVVLQSS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0210 315 MobiDBLite consensus disorder prediction 87 108 - -
Bisa05g0210 315 SUPERFAMILY WRKY DNA-binding domain 242 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g0210 315 Gene3D WRKY domain 230 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g0210 315 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g0210 315 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g0210 315 FunFam WRKY transcription factor 65 228 305 - -
Bisa05g0210 315 Pfam Plant zinc cluster domain 196 242 IPR018872 -
Bisa05g0210 315 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 26 305 IPR044810 GO:0003700
Bisa05g0210 315 MobiDBLite consensus disorder prediction 94 108 - -
Bisa05g0210 315 Pfam WRKY DNA -binding domain 246 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0210 Bisa-ChrBisa05 3192897 3194041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0210 24 265 WRKY Transcription Factor Family AT4G24240 46.619 1.00e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa05g0210 WRKY 2.6e-25 CL0274