Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0206 ATGGCTCATCATCATCATCATCATCATCAAGAGAACCCAAGATTCCATCTGGATGCCTTGTACTGTTCAGAAGAGAATTGCGAGGAACAAGTAGGGCCCGATTATTGCGCACACGAATTAGAGCAAATAGATGACGTTTACATTGGCAGTTCTACTCAATTAAACTCAGCACCGATGTTGCTAGAACAGGACATGTTGTGGGATGATGAAGAGTTAACGTCTCTGCTCTCCAGAGAACACCGAAATCAACTCTATACCTTACCCGAAACCCACCCTCTTCTTCCCGGAGCTCGCAGAGAAGGCGTAGACTGGATTCTCAGAGTGAATGCTCACTTCTCTTTCTCTGCTCTCACCGCTCTTCTTGCCGTCAACTACCTCGACAGATTCCTCTTCGGCTTCCAAATTCAGGAGGGGAAGCCATGGATGACCCAACTTGCGGCCGTCACGTGTCTTTCCCTCGCGGCTAAAGTGGAGGAGACCCATGTCCCTCTTCTACTAGACCTCCAAGTGGAGGACAGTAGATACGTGTTCGAAGCCAAAACCATCAAAAGGATGGAGATTTTGGTGCTTTCCACTCTCGGGTGGAAGATGAACCCCGTAACCCCACTCTCATTCCTCGATTACATCGCGCGGAGACTGGGGTTAAAGGATTATCTCTGCTGGGAGTTCCTCAGGAGATGCGAAGGCATTCTTCTCTCTGCGATTTCGGATTGGAGGTTTATGCGTTATCTTCCTTCAGTGGTGGCCACTGCCACGATGATGCACGTTGTGAATAGTGTGGAGGCACGTCTTGGCATTGAATACCAGAATCAGCTTCTGGGAATTCTAGGAATCCACAAGGATGAGGTGGATGAATGTTACAAGCTGATAATGGAAACGACGTCGCAGGGGGAGCGACGAAAAAAGCGCACGTTTTGTTCCACTCCGGGAAGTCCAAACGGCGTGATGGAAGCGTCGTTTAGCTGTGACAGCTCGAACGACTCATGGGCCGTAGCCACAGCCTCTGTTTCGTCCTCACCGGAGCCACTCTCCAAGAAGAGTAGGACTCAAGAAGATCAGCATGAGCTTCTGCTAAACCGTCCTAATTCAGATGATTTTCTGAGCATTCCTCGCTAG 1116 0.4955 MAHHHHHHHQENPRFHLDALYCSEENCEEQVGPDYCAHELEQIDDVYIGSSTQLNSAPMLLEQDMLWDDEELTSLLSREHRNQLYTLPETHPLLPGARREGVDWILRVNAHFSFSALTALLAVNYLDRFLFGFQIQEGKPWMTQLAAVTCLSLAAKVEETHVPLLLDLQVEDSRYVFEAKTIKRMEILVLSTLGWKMNPVTPLSFLDYIARRLGLKDYLCWEFLRRCEGILLSAISDWRFMRYLPSVVATATMMHVVNSVEARLGIEYQNQLLGILGIHKDEVDECYKLIMETTSQGERRKKRTFCSTPGSPNGVMEASFSCDSSNDSWAVATASVSSSPEPLSKKSRTQEDQHELLLNRPNSDDFLSIPR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0206 371 CDD CYCLIN_AtCycD-like_rpt1 97 195 - -
Bisa05g0206 371 Gene3D - 199 288 - -
Bisa05g0206 371 CDD CYCLIN_AtCycD-like_rpt2 200 290 - -
Bisa05g0206 371 Pfam Cyclin, N-terminal domain 89 198 IPR006671 -
Bisa05g0206 371 SUPERFAMILY Cyclin-like 66 198 IPR036915 -
Bisa05g0206 371 FunFam CYCLIN D32 199 288 - -
Bisa05g0206 371 PANTHER CYCLINS 66 295 IPR039361 -
Bisa05g0206 371 Pfam Cyclin, C-terminal domain 200 323 IPR004367 -
Bisa05g0206 371 SUPERFAMILY Cyclin-like 201 296 IPR036915 -
Bisa05g0206 371 FunFam D3-type cyclin 91 198 - -
Bisa05g0206 371 MobiDBLite consensus disorder prediction 345 359 - -
Bisa05g0206 371 SMART cyclin_7 103 191 IPR013763 -
Bisa05g0206 371 Gene3D - 89 198 - -
Bisa05g0206 371 MobiDBLite consensus disorder prediction 333 371 - -
Bisa05g0206 371 SMART Cyclin_C_2 200 324 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0206 Bisa-ChrBisa05 3147119 3148508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0206 1 356 Core Cell Cycle Gene Families AT5G67260 45.753 1.47e-93 284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0206 05 3147119 3148508 Bisa11g1448 11 34255178 34259231 ECH
Bisa05g0206 05 3147119 3148508 Bisa01g2026 01 35706741 35708083 ECH
Bisa05g0206 05 3147119 3148508 Bisa05g0206 05 3147119 3148508 ECH