Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0203 ATGGCTTCCTCAAAGAAGGACCTCGATCGTATTAAAGGTCCATGGAGTCCCGAGGAAGACGAAGCCTTACAAAGACTGGTTCAGAATTACGGCCCTAGAAACTGGTCTCTCATCAGCAAGTCCATTCCCGGTCGATCCGGCAAGTCCTGCCGTTTACGCTGGTGCAACCAGCTCTCTCCCGCCGTCCAGCACAGGCCTTTCACTCCCGACGAGGACGACACCATCATCAGAGCACACGCCAGGTTTGGCAACAAGTGGGCCACAATCGCTCGCTTGCTCCATGGTCGCACCGACAACGCCATCAAAAACCACTGGAACTCCACCCTCAAGAGGAAATGCTCCGCCATCACCGATCCTCTCAATCCCGATTACAATGACCACCACCCTCTCAAAAGATCCGCCAGTGTCGGCGCCGCCCCTACCGTTTCCGGTTTGTACTTGAACCCGAGTAGCCCCTCCGGCTCTGATTTGAGCGATACTAGTTTGCCCGCTATGTCTCCTACACAGGTTTACACACCATTTGCTCTGACCTCATCACATCAAAGGGAAACTACCTCCTCTGCCAATGATCCACCTACATCGCTAAGTCTATCACTACCCGGATCCGATGAGCCCTCCAACCATGGATCCGGATCGAATCAAACTGCGGGCCCCACCCAGGTACAGCCAAGTTCACCATCGCCAGCGATTTTGGCACCAGCTACGGCTATGGTAGGAAAAGGATCAGTGCAGCAAGAACCTTTACCAGCTCAGAGCAGTCAGGGATGTGATCAGTTTGTTCCCGAGAGACAGTTCTTCAGCGCCGAATTTTTGGCGGTGATGCAAGAGATGATAAAGAAGGAAGTGAGGAACTACATGTCTGGGATGGAGCCGAATGGTCTGTGTATGCAGACTGAAGCTACTATCAGAAACGCGGTTGTCAAGAGAATTGGAATGAGCGGGGTCGAGTAG 951 0.531 MASSKKDLDRIKGPWSPEEDEALQRLVQNYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPAVQHRPFTPDEDDTIIRAHARFGNKWATIARLLHGRTDNAIKNHWNSTLKRKCSAITDPLNPDYNDHHPLKRSASVGAAPTVSGLYLNPSSPSGSDLSDTSLPAMSPTQVYTPFALTSSHQRETTSSANDPPTSLSLSLPGSDEPSNHGSGSNQTAGPTQVQPSSPSPAILAPATAMVGKGSVQQEPLPAQSSQGCDQFVPERQFFSAEFLAVMQEMIKKEVRNYMSGMEPNGLCMQTEATIRNAVVKRIGMSGVE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0203 316 MobiDBLite consensus disorder prediction 178 229 - -
Bisa05g0203 316 MobiDBLite consensus disorder prediction 178 231 - -
Bisa05g0203 316 FunFam Transcription factor MYB44 66 112 - -
Bisa05g0203 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Bisa05g0203 316 Gene3D - 65 133 - -
Bisa05g0203 316 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Bisa05g0203 316 Gene3D - 11 63 - -
Bisa05g0203 316 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Bisa05g0203 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 113 IPR017930 -
Bisa05g0203 316 CDD SANT 14 56 IPR001005 -
Bisa05g0203 316 MobiDBLite consensus disorder prediction 145 166 - -
Bisa05g0203 316 SMART sant 63 111 IPR001005 -
Bisa05g0203 316 SMART sant 11 60 IPR001005 -
Bisa05g0203 316 FunFam MYB transcription factor 12 63 - -
Bisa05g0203 316 Pfam Myb-like DNA-binding domain 66 108 IPR001005 -
Bisa05g0203 316 Pfam Myb-like DNA-binding domain 12 58 IPR001005 -
Bisa05g0203 316 PANTHER MYB PROTEIN-RELATED 12 197 - -
Bisa05g0203 316 CDD SANT 66 109 IPR001005 -
Bisa05g0203 316 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0203 Bisa-ChrBisa05 3107177 3108127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0203 9 316 MYB Transcription Factor Family AT5G67300 50.157 3.36e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa05g0203 Myb_DNA-binding 9e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0203 05 3107177 3108127 Bisa01g2030 01 35774086 35775126 ECH
Bisa05g0203 05 3107177 3108127 Bisa05g0203 05 3107177 3108127 ECH