Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0202 ATGCATATCTTAATCTTCATCCTCCTTCCATTTGCATTGTGGATTCCTTCCCCATGTTCATCTGCAGCCTCTGATACCATCCCAGAAGGCTCCTCTCTCTCTGTTGAGAAGTCAACCGATACTCTTGTTTCATCCAATGGTGACTTCTCCGCTGGCTTCTTTCAAGTGGGAGATAACGCTTTCTGCTTTTCCATATGGTTTGCGAAGTCCAAACAACCCACCCTTGTTTGGATGGCAAATCGAGACGAACCAGTTAACGGTAAAGCTTCAAAATTAACACTTTTAAGAAACGGGAATCTCGTTCTAAACGACGCAGGAGGAGTCACCATTTGGACCACCACGACCTTCTCCTCTAGGGAAGTTCAGCTAAAGCTCTCGAACAACGGCAACCTCGTCCTTCGCACTTTACAAGGCAATACTGTCCTTTGGCAAAGCTTTGACTCCCCCACCGATACCCTTCTTACCGGTCAACCACTCACCGAAAATGCAAGACTTGTTTCATCCAGAAGCACCACCAACTTCTCCTCTGGCTTCTATAAGCTTTCATTCGACAACGACAACGTTCTTCGCCTTGTCTTCAAAGGTCCTAATGCATCCAGCGTGTACTGGCCAGGCACGTGGGAAACTTCCGCTGATGCTGGCAGGTCCACCTACAACATGTCTAAAATTGCAGTGGTAGATCCCGTTGGCCATTTCAAATCCTCTGACAAGTTCGAAACTTATTCCTCCGATTATGGTGTTAGACGATACAGACGATTCGTGTTGGATCCTGATGGAAACTTGCGCCTCTATAGTTTCAACGAGGAGAATAACACGTGGGAGGTTTCATGGCAAGCGATTTCCCAGCCGTGTGTAGTTCATGGTCTTTGTGGAGCTAATAGCATGTGCACATACGATCCTTTTGGGGACAGGACTTGCAATTGCTTGCCAGGATTCACGATTAAGGATCCCAACGATTGGACTCAGGGGTGTGAACCTCAATTTACTAAACCCTCCTGCAATCACACAGAGTTTGGATTCCTCCGTCTTCAAAACATGGAATTTTACGGCTACGACTTGAAACTAGTCCGGGTTTCGAACTTGACAGAATGTGAAGATATATGTTTGGAATCCTGTGACGATTGCAAAGGCATCCAGTTCAATACCAACGACTACAATACATACGATTGTTACGTCAAAACGATATTGCTCAACGGACGGGGTTTCCTCAGTTTCCAAGGAGATATCTATGTCAAATTGCACAAATCCACTCTGCTCTCCACCAAAGATCCTTTGAAATTGCATGTACCGTTGAGGTGCTCACCTGGTCTATCTAAAAGTTTGTATAGAATTTATGAATACCCAAAGGGAAGCGTGTTGTTGAATTTTTTGCTTTGGTTCGCTTGCGGGATCGGGGCGCTTGAGATCACTTGCATTTTCCTGGTTTGGTTATTCTTATTTAGAAGCAGTAAGGGAAATGATAAAGGAGAAAGACAACAGCTTCTTTCTGCTACAGGGTTTCAGAGGTTCAGCTATTCAGAGCTCAAGAAGGCCACAAACGGATTCAGCAATGAGATTGGACGAGGGGCGGGAGGGACCGTGTACCGAGGGACATTACATGATAATCGTATGGCAGCAATCAAGCAGCTTACCAGCGAAGCTAATCAAGGAGAAGCAGAGTTTCTTGCTGAAATAAGCACAATCGGGATGCTTAACCACATGAATTTGATAGACATGTGGGGTTACTGCGTGGAAGGGAATCATAGACTATTGATGATAACGGGAAGGAGTCCAATAGGATTCGATGGCCCGGAAATCATAGAGGGGAATATAGATCAACGGAGGTTGGTGTCATGGGTGAAGGAAAAGATAAGTGGGGCTCCGACGAGCAGGTTTTGGATGGAGGAGATAGCAGATCCCAATATGGAAGGACAATACGACCCTGCCATGTTTGAGGTTTTGGTGAAAGTGGCTTTGCAGTGTGTGGAAGATGACAAAGGTCAAAGACCCTCCATGGGTCAAGTTGTGGAGATGCTTCAGATACCTGAATAG 2031 0.4574 MHILIFILLPFALWIPSPCSSAASDTIPEGSSLSVEKSTDTLVSSNGDFSAGFFQVGDNAFCFSIWFAKSKQPTLVWMANRDEPVNGKASKLTLLRNGNLVLNDAGGVTIWTTTTFSSREVQLKLSNNGNLVLRTLQGNTVLWQSFDSPTDTLLTGQPLTENARLVSSRSTTNFSSGFYKLSFDNDNVLRLVFKGPNASSVYWPGTWETSADAGRSTYNMSKIAVVDPVGHFKSSDKFETYSSDYGVRRYRRFVLDPDGNLRLYSFNEENNTWEVSWQAISQPCVVHGLCGANSMCTYDPFGDRTCNCLPGFTIKDPNDWTQGCEPQFTKPSCNHTEFGFLRLQNMEFYGYDLKLVRVSNLTECEDICLESCDDCKGIQFNTNDYNTYDCYVKTILLNGRGFLSFQGDIYVKLHKSTLLSTKDPLKLHVPLRCSPGLSKSLYRIYEYPKGSVLLNFLLWFACGIGALEITCIFLVWLFLFRSSKGNDKGERQQLLSATGFQRFSYSELKKATNGFSNEIGRGAGGTVYRGTLHDNRMAAIKQLTSEANQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGNHRLLMITGRSPIGFDGPEIIEGNIDQRRLVSWVKEKISGAPTSRFWMEEIADPNMEGQYDPAMFEVLVKVALQCVEDDKGQRPSMGQVVEMLQIPE 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0202 676 PANTHER OS07G0415500 PROTEIN 6 584 - -
Bisa05g0202 676 SMART tyrkin_6 515 672 IPR020635 GO:0004713|GO:0006468
Bisa05g0202 676 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Bisa05g0202 676 SMART ntp_6 335 413 IPR003609 -
Bisa05g0202 676 FunFam S-receptor-like serine/threonine-protein kinase 482 587 - -
Bisa05g0202 676 Pfam S-locus glycoprotein domain 232 314 IPR000858 GO:0048544
Bisa05g0202 676 ProSiteProfiles EGF-like domain profile. 280 318 IPR000742 -
Bisa05g0202 676 Gene3D Phosphorylase Kinase; domain 1 486 587 - -
Bisa05g0202 676 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Bisa05g0202 676 CDD PAN_AP_plant 329 413 - -
Bisa05g0202 676 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 207 IPR036426 -
Bisa05g0202 676 CDD B_lectin 41 149 IPR001480 -
Bisa05g0202 676 ProSiteProfiles PAN/Apple domain profile. 333 418 IPR003609 -
Bisa05g0202 676 Pfam D-mannose binding lectin 74 168 IPR001480 -
Bisa05g0202 676 Pfam Protein kinase domain 517 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0202 676 SUPERFAMILY Protein kinase-like (PK-like) 495 672 IPR011009 -
Bisa05g0202 676 SMART blect_4 33 149 IPR001480 -
Bisa05g0202 676 Gene3D - 19 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0202 Bisa-ChrBisa05 3099931 3102321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0202 503 585 Trihelix Transcription Factor Family AT1G26150 51.765 3.12e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa05g0202 S_locus_glycop 1.5e-11 No_clan