Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0189 ATGACGCAAAGACACAACTTTTACTCTTTGTCTGATCTTCTCATTAGTCAAAAGCTGACATCATGCTCCCCATTATCTTCTCCGGGTTCTCGACACCGTCTTTCCAAGCGCATCATTCTTCCGTCAGTTTCCATGGAGGGGTTTATGACTGTCTCCTTCTTATTACTCATTTTATCTTCATTTTTTCAATTTTCGTCTTCCACTATCCAAACTCTCTACAACGGCGACACCCTTTCAGTGGAGAACCCAGAAGATGTTCTGGTTTCACCAAATGGCGTCTTCTCTGCCGGCTTTCAAGTTGTCGGTGATAATGCCTATTGTTTCGCCGTCTGGTTCACCCACAGTCCCACCGTCGTTTGGATGGCAAATCGTGACCAACCAGTCAACGGAAAGCGCTCTACACTTTCCCTTAATTCTGGAAATCTTCTCTTAACCGATGCCGCCGAATTCAACGTTTGGACCACTGACACTTCCTCATCCTCCTCTGTTGAGTTGCTTCTCCACGACACTGGTAATCTTGTTCTGCGCAAAGCAAAAGATGTCATTTTGTGGCAGAGCTTTGATTCCCCTACTGATACTCTCCTTCCTCAACAACTACTTACAAGAAATACAAAGCTTGTCTCGTCTAGAAGCGAGACAAACCAATCCTCTGGTTTTTATTCTTTGTTTTTCGACAACGACAACGTTCTCCGTCTTCTCTACGATGGTCCTGAAATTTCAAGTATTTATTGGCCAGATCCTGGGCTGGTGAGCTGGGAGGCAGGGAGGAGCACTTACAATGGAAGTAGGATTGCGATGCTTGATTCTTTAGGCAATTTCACTTCATCGGACACGTACAGTGTCATAACATCTGATTATGGCACGGTGCTTCAGAGAAGATTGAAAATTGATTATGATGGTAATATTCGTGTTTACAGTCTAAGATCTAAAACAGAGGAATGGTATGTGTCCTGGCAGGCCATATCAACACCCTGCACAATTCATGGAATCTGTGGTGCTAATAGTTTGTGTAGCTATGATCCTGGTTCAGGAAGGAAATGCTCTTGCCTTTCAGGTTTTCAACGGAGGAATGCTAGTGATTGGTCTTTGGGGTGTGAACCAATTCACAATTTCTCTTGCAACCCAAGTGAGTCTAACATTTTAGATCTTTCACACGTTGATTTCTACGGCTATGATCGTGAATATACACCAAATATCACTTTTCAGCAATGTTTGAACTTGGTTCTGCGGTCTTGCGATTACAAAGGTTTCCAATATAAATTTAGTGAGGAGGACGGCTTTTATAAATGTTTCCCAAAGACGTTATTGATGAATGGGTATCTTTCACCCGATTTCGTAGGGGATGTTTACTTGAGACTGCCTAAAAGCTCTTCTTCATTCTCCATGGAGGAATCAATTAAAGAACCAAGTGTTGTTTGTTCAAACGAAACAATAGTGCTTGAAAAAGGGTATGAGAAAGCCCATGAAAACGGAAAAGTGAAGCTGGTGGTTTTATTTGCTTGTGGTATAGGTCTGTTAGAGATCATTTGTATCCTTTGGGTATGGGTTTCTCTGCTAAGAAATCGAAGACTGTCTTATGCATACGAACAAGGCTACCTTCCCATAGGCTCTGGATTCAAAAAATATGGTTACAGTGAGCTAGAAAAGGCAACAAGAGGTTTTCGTCAAGAGATTGGAAGAGGTGCAAGTGGGATTGTATACAAAGGTGAACTATCAGATCATCGAGTTGCAGCAATTAAGAGACTCAACGAGGCTAATCAAGAAGAGGAAGAATTTCTTGGTGAAGTAAGCATCATTGGGATGCTTAATCACATGAACCTAATCAAAATGTGGGGCTATGGAATAGTGGTGCTGGAGATGGTGACAGGAAAGAATCCAACAATGGGTGGAGACAGGGACTTACATGGGAGTGTTAGAGAAGGGAGACAACATAGGCTGGTGGCATGGGTGAGGGAGATGAAAAGCCAAGCATCCTCAACCTCAAGGGCCTCTTGGTTGGAGCATATAATGGAGCCCATGATAGTAGAAGAAGGAAACATGGAGTGGGATAAGGTGGAAATTTTGGTGGAAGTGGCTTTACAATGCGTTGAGGAAGATAGAGATGTAAGGCCTACCATGAAACAAGTAGTTGAACTCTTACAAAGTCAAGATAATGAGTGA 2160 0.4269 MTQRHNFYSLSDLLISQKLTSCSPLSSPGSRHRLSKRIILPSVSMEGFMTVSFLLLILSSFFQFSSSTIQTLYNGDTLSVENPEDVLVSPNGVFSAGFQVVGDNAYCFAVWFTHSPTVVWMANRDQPVNGKRSTLSLNSGNLLLTDAAEFNVWTTDTSSSSSVELLLHDTGNLVLRKAKDVILWQSFDSPTDTLLPQQLLTRNTKLVSSRSETNQSSGFYSLFFDNDNVLRLLYDGPEISSIYWPDPGLVSWEAGRSTYNGSRIAMLDSLGNFTSSDTYSVITSDYGTVLQRRLKIDYDGNIRVYSLRSKTEEWYVSWQAISTPCTIHGICGANSLCSYDPGSGRKCSCLSGFQRRNASDWSLGCEPIHNFSCNPSESNILDLSHVDFYGYDREYTPNITFQQCLNLVLRSCDYKGFQYKFSEEDGFYKCFPKTLLMNGYLSPDFVGDVYLRLPKSSSSFSMEESIKEPSVVCSNETIVLEKGYEKAHENGKVKLVVLFACGIGLLEIICILWVWVSLLRNRRLSYAYEQGYLPIGSGFKKYGYSELEKATRGFRQEIGRGASGIVYKGELSDHRVAAIKRLNEANQEEEEFLGEVSIIGMLNHMNLIKMWGYGIVVLEMVTGKNPTMGGDRDLHGSVREGRQHRLVAWVREMKSQASSTSRASWLEHIMEPMIVEEGNMEWDKVEILVEVALQCVEEDRDVRPTMKQVVELLQSQDNE 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0189 719 SMART blect_4 77 190 IPR001480 -
Bisa05g0189 719 SUPERFAMILY Protein kinase-like (PK-like) 537 613 IPR011009 -
Bisa05g0189 719 PANTHER OS07G0415500 PROTEIN 52 613 - -
Bisa05g0189 719 SMART tyrkin_6 554 713 IPR020635 GO:0004713|GO:0006468
Bisa05g0189 719 Pfam Protein tyrosine and serine/threonine kinase 555 612 IPR001245 GO:0004672|GO:0006468
Bisa05g0189 719 PIRSF SRK 613 719 IPR024171 GO:0004674
Bisa05g0189 719 PIRSF SRK 42 614 IPR024171 GO:0004674
Bisa05g0189 719 Gene3D Transferase(Phosphotransferase) domain 1 611 719 - -
Bisa05g0189 719 SUPERFAMILY alpha-D-mannose-specific plant lectins 108 246 IPR036426 -
Bisa05g0189 719 Gene3D - 189 316 IPR036426 -
Bisa05g0189 719 SUPERFAMILY Protein kinase-like (PK-like) 610 711 IPR011009 -
Bisa05g0189 719 ProSitePatterns Protein kinases ATP-binding region signature. 558 580 IPR017441 GO:0005524
Bisa05g0189 719 Gene3D - 63 188 IPR036426 -
Bisa05g0189 719 ProSiteProfiles Protein kinase domain profile. 552 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0189 719 ProSiteProfiles Bulb-type lectin domain profile. 63 188 IPR001480 -
Bisa05g0189 719 FunFam S-receptor-like serine/threonine-protein kinase 521 616 - -
Bisa05g0189 719 FunFam Serine/threonine-protein kinase 191 318 - -
Bisa05g0189 719 Pfam S-locus glycoprotein domain 287 356 IPR000858 GO:0048544
Bisa05g0189 719 Pfam D-mannose binding lectin 117 207 IPR001480 -
Bisa05g0189 719 Gene3D Transferase(Phosphotransferase) domain 1 539 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0189 Bisa-ChrBisa05 2867770 2870304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0189 538 613 Receptor kinase-like Gene Family AT3G19300 42.857 2.07e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa05g0189 S_locus_glycop 7e-10 No_clan