Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0177 ATGAGTCCGCAGTCACGAGAAGATGAATCCCAAGAAGGTGACAGGGACGAAGAAGAGAAGCGGTTGCTTCAAGCCCAATCCGAATCACGACCATCGACATCGTCATCGGATGAAGAAGAGGCCGCTTATGAAGCAGGGGAGAAAATTCTCATAGTAGATTTGAACTCTGCCGACGATGAGGATTCGACGACGGTGCCACCTTTCTCGTGGAAGAAGTTGTGGCTATTCACAGGACCAGGGTTCCTGATGAGCATAGCTTTTCTGGATCCGGGAAATCTAGAAGGAGATCTCCAGGCTGGAGCCATCGCCGGCTACTCGCTACTCTGGCTATTGCTGTGGGCCACATTAATGGGCTTGCTGATTCAGCTTCTCTCAGTAAGGATTGGGGTGGCTACTGGTCGGCACCTGGCGGAGCTGTGCAGGGACGAATATCCTAATTGGGCTAGGTTGGTGCTGTGGTTCATGGCCGAGCTGGCCTTGATTGGCGCTGATATTCAAGAGGTCATTGGGAGTGCCATCGCTATACAAATTCTGAGCCATGGGGTGTTGCCGCTCTGGGCTGGAGTCGTAATTACTGCTTCCGATTGTTTCATCTTTTTATTTCTTGAGAACTATGGAGTAAGGAAGCTAGAGGCTGCTTTTGCAGTTCTCATTGCAACAATGGCTCTTTCTTTTGCCTGGATGTTTGGTGACACAAAACCTAGTGGAAAAGAACTCTTGATGGGTATTTTGCTTCCAAGACTTAGCTCAAAAACAATTCGCCAGGCTGTGGCAGTTGTGGGTTGTGTCATAATGCCTCACAATGTATTCCTGCATTCTGCTTTGGTGCAGTCAAGGAAGATTGATCCGAATAAGAAAGGCCAGGTGAAGGAGGCTCTTAACTATTATACTATTGAGTCGACAGTTGCTCTTTCAGTCTCCTTCATGATCAACCTTTTTGTGACTACAGTTTTTGCTAAGGGTTTTTACGGTACAAAGCAGGCCAATAGCATTGGACTAGTAAATGCAGGGCAGTATCTTGAGGAAAAGTATGGAGGAGGGGTATTCCCAATTCTTTATATATGGGGTATTGGGTTATTGGCAGCTGGACAGAGTAGCACCATCACTGGCACATATGCTGGGCAGTTCATTATGGGGGGTTTTCTCGACCTTCGTTTAAAGAAATGGTTGAGGGCATTAATCACTCGAAGTTTTGCAATTGTGCCAACTATGGTTGTAGCTATTGTTTTTAATACATCCGAAGCATCACTGGATGTTCTGAATGAATGGCTTAATGTGCTTCAGTCGATGCAGATTCCTTTTGCATTAATTCCCCTCCTTACCTTGGTCTCCAAAGAGGATGTCATGGGGTCCTTTAGGGTTGGGCCTGTTCTTGAGAGGGTAGCATGGACTATTGCTGCGCTGATAATGGTGATCAATGGGTATCTCTTGTTAGATTTCTTCCTTTTGGAAGTGAACGGGCCACTGGTTGGTTTTGTAGTATGCTCCTGCACAGCTGCATATGTGGCATTCATTGTATATTTGGTTTCACTGAGTGGTGTTCTTCCTTCCTCTTGGGTTAATCTACTTCCCAAGAGATTCTCTTTTTCTGGTATATAA 1599 0.4609 MSPQSREDESQEGDRDEEEKRLLQAQSESRPSTSSSDEEEAAYEAGEKILIVDLNSADDEDSTTVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLLWATLMGLLIQLLSVRIGVATGRHLAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSHGVLPLWAGVVITASDCFIFLFLENYGVRKLEAAFAVLIATMALSFAWMFGDTKPSGKELLMGILLPRLSSKTIRQAVAVVGCVIMPHNVFLHSALVQSRKIDPNKKGQVKEALNYYTIESTVALSVSFMINLFVTTVFAKGFYGTKQANSIGLVNAGQYLEEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLDLRLKKWLRALITRSFAIVPTMVVAIVFNTSEASLDVLNEWLNVLQSMQIPFALIPLLTLVSKEDVMGSFRVGPVLERVAWTIAALIMVINGYLLLDFFLLEVNGPLVGFVVCSCTAAYVAFIVYLVSLSGVLPSSWVNLLPKRFSFSGI 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0177 532 MobiDBLite consensus disorder prediction 1 42 - -
Bisa05g0177 532 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 71 449 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0177 532 Hamap Divalent metal cation transporter MntH [mntH]. 58 481 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0177 532 NCBIfam Nramp family divalent metal transporter 78 447 - -
Bisa05g0177 532 PRINTS Natural resistance-associated macrophage protein signature 256 279 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0177 532 PRINTS Natural resistance-associated macrophage protein signature 363 382 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0177 532 PRINTS Natural resistance-associated macrophage protein signature 391 408 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0177 532 PRINTS Natural resistance-associated macrophage protein signature 207 228 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0177 532 PRINTS Natural resistance-associated macrophage protein signature 182 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0177 532 PRINTS Natural resistance-associated macrophage protein signature 425 444 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0177 532 PRINTS Natural resistance-associated macrophage protein signature 152 178 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0177 532 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 41 510 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0177 532 MobiDBLite consensus disorder prediction 1 25 - -
Bisa05g0177 532 Pfam Natural resistance-associated macrophage protein 94 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0177 Bisa-ChrBisa05 2687169 2691603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0177 7 530 Inorganic Solute Cotransporters AT1G47240 78.977 0.0 827