Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0150 ATGGCGGCCTCAGTGGATGCGTTGTGCCCAGAAGCAGTTCGCAAATATGCAGTAATCGGTAGTAAACAAGATAGAGCTTTGATTCTTGATGTCAGAAATCGTCTTCTTGAACTAGGCTGGAAAATCCACTGTACTCAAGATGCTTCTCCTCCGAAGTACTCTTATACGTCGCCGGACGGGAAGATTTACTATTCTCTTAAGAAAATCTGTCAAGTTTTGGCCGCGAAACCTCTAATCTCTGACGACCACGGTTACTATTCATGTTTGCTCGATTCTTCTCAGCATGACGACGGTTCATTACTTGTTGAACAAGCAAAAGACGGTAAAACCCCTTTTCAGGATTTGGAGGCTTATTCTTCTATTTCTGAATCTGATGCACTCGTTGCTGAGTCCGAATATTGCCCTCAAGCAGTGATTGACTGGTATGTGCTAACCGGACAAGCTGACTCTGCGGCCAAGAGCAGAAGCTATTCATTGAGCGCTTTGTCGTTAAAAGCGAAGAAGCATCTTCGTGCTTTGGGGTGGACCTTCTGGTATGCTGATAAGAAGGGAAAGCAGGAGTTGCGTTATAAGTCTCCTCACACAGGCAAGAACTATTACTCTCTTAGAATGGCCTGTAAATCCTGCATAGAAGATGGAGTACGGGGGCCTGAAAGTGTTTCTTCTAATCAACAGCCTCTGGGTCCCGTCAATGTGAGTCCTGAAATTGAGTTCCCTTCAACTAATACAAGTCCATCTTCTGCAGAAACAGGCACAGTACAAACGAGTATGAAGAGGTCAAGAAGATGCAGGAAAAGAAAGAGAGAGTCATTATGTGATGATGATTATGAAGCCGAAATAGATGCCTTCTGTTCGGTAGGTGGTAAAAGAAGCAGGCAAATACGATCAAGCGAAAGATTGCGCAAAGAGGATGAGTCGTTATGTGATGATGATTATGAGGCCGAATTAGATGCCTTCTGTTCTGTAGCTCGTAAAAGAAGCAGGCAACTACGATCAATCAAAAGAGTGCGCAAAGGGGATGAGTCATTATGTGATGATGATTATGAAGCCAAATTAGATGCCTTCTGTTCTGTAGGTGGTAAAAGAAGAAGGAAAATACGATCAAGCAAAAGAGTGCGTAAAGGGGTTGAGTCAGCAACTACTGAACCTGTACAGCGCAATCCGCGAACAGTTGTGTTTTGGTTGATAGACAAAGAAGTGATATTTCCAGGAGCTGAAGTCCATTACCGAAATGGAAAGGAAGTGCTGAAGAAAGGAAGGATCTGTGGTAAGGGAATCAAATGTGATTGTTGTGGTGAAGACTTCACTCTCAGTAAATTCGAAGCTCATGCTGGGAGTACAAAACACAGACCAGCTGCCAATATCTTCTTGGAAGATGGCAGGTCATTGTTGGATTGCCAAAAGGAAGCCTTGCGAATTAATGGAATGAAAAGCACGAACTGTCAGCTAAGAAAAGTTTCGATGAAGGATCATACATATGAGCGTGAAAATGACAACGTTTGTTCTGTTTGTCATTATGGGGGTGAAATAATTCTCTGTGATCGATGTCCGTCTTCATTTCACCAAAGCTGCTTGGGTCTTGTGGAAATTCCCGATGGCGATTGGTTCTGCCCATCATGTTGTTGCAAAATATGCAGCCAAGGCAGATACAAAGGAGATTCTGATGATTGCGAGGATTATAGTGTTCTCGTTTGTGACCAATGTGAACGTAAATATCACACTGGGTGCCTAAAGATTAAAGGGTGTACCAAGCTGAAAAACCATCCTAATGAAAATTGGTTCTGTAGTGTAAACTGTGAAAATATACATTTGGGCCTGCAGAATCTGTTAGGAAAACCATTTTTTGTGGGTGCAGATAATCTGACCTGGACATTGTTGAAGACTAGGGAAACCAAAAATCCGGAAGCTGACACTTTTGATCATATGGAAGCTTTGACACAGATTGAGAGCAAGCTGAATGTGGCTCTGGAAGTGATGCATGAGTGTTTCGAGCCAGTCAATGAAGCTCGTACTGGGAGAGATCTTGTTGGAGATGTTATTTTCAGTAGAGGTTCAGAACTTGGTCGTTTGAACTTTCGAGGTTTCTATACTGCAATTTTGGAGAGGAACGACGAAGTGATCACCGTTGCCACTGTAAGGATCTATGGGCAAAAGGTTGCAGAAGTGCCTCTTGTGGCCACTAGGTTCCAGTTTCGAAGACTTGGAATGTGTCGTTTTCTGATGAACGAGCTTGAGAAGAAGCTGAGTGACTTGGGCGTGGAGAGGATAGTTTTGCCTGCTGAGCAGTCAGGCCTAAACCTTGTGTTGATCTGCAGCAGAACCATCTTTTATCTAGCATTGCCGGTTGCATTACCGAGACTTGTTACTAGAAATGGGGTTATGGAATTGTGA 2391 0.4341 MAASVDALCPEAVRKYAVIGSKQDRALILDVRNRLLELGWKIHCTQDASPPKYSYTSPDGKIYYSLKKICQVLAAKPLISDDHGYYSCLLDSSQHDDGSLLVEQAKDGKTPFQDLEAYSSISESDALVAESEYCPQAVIDWYVLTGQADSAAKSRSYSLSALSLKAKKHLRALGWTFWYADKKGKQELRYKSPHTGKNYYSLRMACKSCIEDGVRGPESVSSNQQPLGPVNVSPEIEFPSTNTSPSSAETGTVQTSMKRSRRCRKRKRESLCDDDYEAEIDAFCSVGGKRSRQIRSSERLRKEDESLCDDDYEAELDAFCSVARKRSRQLRSIKRVRKGDESLCDDDYEAKLDAFCSVGGKRRRKIRSSKRVRKGVESATTEPVQRNPRTVVFWLIDKEVIFPGAEVHYRNGKEVLKKGRICGKGIKCDCCGEDFTLSKFEAHAGSTKHRPAANIFLEDGRSLLDCQKEALRINGMKSTNCQLRKVSMKDHTYERENDNVCSVCHYGGEIILCDRCPSSFHQSCLGLVEIPDGDWFCPSCCCKICSQGRYKGDSDDCEDYSVLVCDQCERKYHTGCLKIKGCTKLKNHPNENWFCSVNCENIHLGLQNLLGKPFFVGADNLTWTLLKTRETKNPEADTFDHMEALTQIESKLNVALEVMHECFEPVNEARTGRDLVGDVIFSRGSELGRLNFRGFYTAILERNDEVITVATVRIYGQKVAEVPLVATRFQFRRLGMCRFLMNELEKKLSDLGVERIVLPAEQSGLNLVLICSRTIFYLALPVALPRLVTRNGVMEL 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0150 796 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 542 602 IPR013083 -
Bisa05g0150 796 SUPERFAMILY FYVE/PHD zinc finger 490 545 IPR011011 -
Bisa05g0150 796 Pfam PHD-finger 501 542 IPR019787 -
Bisa05g0150 796 Gene3D - 629 767 - -
Bisa05g0150 796 Pfam Tify domain binding domain 419 470 IPR032308 -
Bisa05g0150 796 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 689 762 IPR016181 -
Bisa05g0150 796 PANTHER PHD FINGER PROTEIN 12 130 761 IPR042163 GO:0003714|GO:0045892
Bisa05g0150 796 MobiDBLite consensus disorder prediction 237 261 - -
Bisa05g0150 796 CDD NAT_SF 699 758 - -
Bisa05g0150 796 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 489 541 IPR013083 -
Bisa05g0150 796 SMART PHD_3 542 599 IPR001965 -
Bisa05g0150 796 SMART PHD_3 500 541 IPR001965 -
Bisa05g0150 796 MobiDBLite consensus disorder prediction 237 257 - -
Bisa05g0150 796 ProSiteProfiles Zinc finger PHD-type profile. 498 543 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0150 Bisa-ChrBisa05 2255312 2257850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0150 159 751 PHD Transcription Factor Family AT5G58610 38.065 5.05e-118 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa05g0150 TDBD 8.9e-23 No_clan