Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0146 ATGTTGTGTGCTTGCTCAGGGGAGCAATTTAAATTTGAAGAGCCGCCACAGTCACCGGAGTCTCTCGCAACGAGGGATTTCTCGGCGAGTGGGCTCTCTTCAAGGACTGGGGATTGGGAAGCGAAATTTGATGACGCCCAAGTGGACGAAGTTGAATCTACTCTCAAAGAGGCTCTCTCCTTGAACTATGAGGAAGCTAGGGCTTTGTTGGGGAGGCTTGAATACCAGAGAGGGAACTTTGAAGCTGCCCTTCAAGTATTTCAGGGGATTGACATTAGGGGATTGACCCCAAGGATGATTAGGGCTATTGCTGTGAGAACTAAGCAGAGAAAACCACGTTCTAAGGCTGATCATGTGCTTCCCACTATGATGTCAATGCATTCAGTAAGCCTGCTTCTTGAGGCTATCCTGCTTAAAGCCAAGTCATTGGAGGAACTTGGACGCTATATTGAGGCTGCAAAGGAATGCAAAACAATTCTGGATACGATTGAATCTGCTTTACCAAGTGGAATGCCGGAAGGATTTGGTGAAGATTGTAAATTACAGGAGATGCTTCACAAAGCATTGGAGTTGCTTCCAAAGCTATGGACCAAGGCAGGCTCTCTAGATGAGGCTGTCACTGCTTATCGACGGGCTCTGGTGAAGCCGTGGAATTTGGAGCCAAGAAGGCTGGCCGGTGTCCAGAAAGATTTAGCTGCCACGCTGCTCTATGGTGGTGTTGAAATAAGCCTTCCCCCTCAGTTGCAAGCATGGGGTTTAACAACACCCAAGACTAACAATGAGGAAGCTGTGCTTTTGTTATTAATACTCATGAGGAAGGTCACACTTCAGGAGATTGAATGGGATCCCGAAATAATGGACCATCTTACATATGCACTTTCAGTTACAGGGATGTTTGAATTATTGGCAGATCACTGGGACCAGATTCTTCCAGGAATCTATAGTCGTGCTGAGAGGTGGTACTTTCTTGCTCTATGTTATAGTGCTGCAGGGCAAAATGAAACCGCATTGAGCCTTCTAAGGAAGGCTTGTGGCAGTTCTGAAACAAAGCATAGCCCCCACTTTCCTTCCTTTTTATTAGGAGCAAAATTATGTTCCCGAGATCCAAACCACGCCCTTGAAGGCATTAACTTCTCACATAAAGTGATTGATCAAGCCAAGCATCAATGTGAGCATTTTCACGGTCAAGGTCACAGATTTCTCGGTGTTTGCTATGGCGCTGCCGCTAGAATTTCTGTACTGGATTATGAAAGAGTTATATACCAAAGAGAGTCTTTGAACTCTTTAAACCAGGCCGCTGTGATGGGAAATCGTCACCCGGAAGTGATATTCAGCCTTGGATTGGAAAATGCAGTTCAAAGAAACCTGGATGCAGCTTATGAGAACGCAATGATGTACTCAGATATGACTGTTGGCAGCTCAAGAAGAGGTTGGCAGCTATTGGCACTCATACTATCTGCACAGCATCGGCTTAAGGATGCTGAAACTATAGTTGATTTTGCAATAGATGAGTCAGGTAGGACGGATCAATTACAACTTTTAAGATTGAAGGCCGTCCTTCAAATTGCTCGGCAGCAACCTAAGCAAGCAATAGAGACCTACAGAATCTTGCTAGCACTAATTCAAGCCAAAAAAGATTTTTGGCTTCAAGATAAGAACTTAGACCAAGCAAACACATTCAAGCATGAGGCATTTACAGAAAGGAACCTGGAAATGGAAGCCTGGCAGGATTTGGCGACCATTTATGCAGATCTTGGTGCCTTACTTGATGCAAAAACTTGTGTGGACAAAGCCCAGTTTCTAGAATTTTTTTCTCCTAAAAGTTGGCATATTACAGGTAAATTGTTTGAAGCTAAATCATTATACAAGGAGGCCCTTGTTTCTTTCTCGTTCTCGTTGTCGATAGAACCAGATTACGTTCCCAGTATGGTTTCAACTGCAGAACTGTTGTTGAAACTTGATATGCAGTCGCTTCCAATTGCAAGAAGCTTTTTAATGAACGCTTTACGACTAGAACCCACAAACCATTATGCGTGGTTCAACCTTGGGCTGATTTCAAAAATGGAAGGTTCATTACAACAAGCTGCTGATTTCTTCCAAGCTTCATATGAGCTAAAGCTATCAGCTCCAGTGCAAAGCTTCGTGTGA 2148 0.4409 MLCACSGEQFKFEEPPQSPESLATRDFSASGLSSRTGDWEAKFDDAQVDEVESTLKEALSLNYEEARALLGRLEYQRGNFEAALQVFQGIDIRGLTPRMIRAIAVRTKQRKPRSKADHVLPTMMSMHSVSLLLEAILLKAKSLEELGRYIEAAKECKTILDTIESALPSGMPEGFGEDCKLQEMLHKALELLPKLWTKAGSLDEAVTAYRRALVKPWNLEPRRLAGVQKDLAATLLYGGVEISLPPQLQAWGLTTPKTNNEEAVLLLLILMRKVTLQEIEWDPEIMDHLTYALSVTGMFELLADHWDQILPGIYSRAERWYFLALCYSAAGQNETALSLLRKACGSSETKHSPHFPSFLLGAKLCSRDPNHALEGINFSHKVIDQAKHQCEHFHGQGHRFLGVCYGAAARISVLDYERVIYQRESLNSLNQAAVMGNRHPEVIFSLGLENAVQRNLDAAYENAMMYSDMTVGSSRRGWQLLALILSAQHRLKDAETIVDFAIDESGRTDQLQLLRLKAVLQIARQQPKQAIETYRILLALIQAKKDFWLQDKNLDQANTFKHEAFTERNLEMEAWQDLATIYADLGALLDAKTCVDKAQFLEFFSPKSWHITGKLFEAKSLYKEALVSFSFSLSIEPDYVPSMVSTAELLLKLDMQSLPIARSFLMNALRLEPTNHYAWFNLGLISKMEGSLQQAADFFQASYELKLSAPVQSFV 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0146 715 Gene3D Tetratricopeptide repeat domain 32 242 IPR011990 GO:0005515
Bisa05g0146 715 Gene3D Tetratricopeptide repeat domain 257 547 IPR011990 GO:0005515
Bisa05g0146 715 SUPERFAMILY TPR-like 478 705 IPR011990 GO:0005515
Bisa05g0146 715 Gene3D - 549 713 - -
Bisa05g0146 715 PANTHER PROTEIN NPG1 1 714 IPR043376 -
Bisa05g0146 715 MobiDBLite consensus disorder prediction 21 35 - -
Bisa05g0146 715 SMART tpr_5 317 350 IPR019734 GO:0005515
Bisa05g0146 715 SMART tpr_5 606 639 IPR019734 GO:0005515
Bisa05g0146 715 SMART tpr_5 133 166 IPR019734 GO:0005515
Bisa05g0146 715 SMART tpr_5 676 709 IPR019734 GO:0005515
Bisa05g0146 715 SMART tpr_5 572 605 IPR019734 GO:0005515
Bisa05g0146 715 SMART tpr_5 511 544 IPR019734 GO:0005515
Bisa05g0146 715 MobiDBLite consensus disorder prediction 12 35 - -
Bisa05g0146 715 Pfam Tetratricopeptide repeat 317 347 IPR019734 GO:0005515
Bisa05g0146 715 SUPERFAMILY TPR-like 65 461 IPR011990 GO:0005515
Bisa05g0146 715 ProSiteProfiles TPR repeat profile. 606 639 IPR019734 GO:0005515
Bisa05g0146 715 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0146 Bisa-ChrBisa05 2212490 2215099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0146 1 715 Calmodulin-binding Proteins AT1G27460 59.944 0.0 865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0146 05 2212490 2215099 Bisa05g0146 05 2212490 2215099 ECH