LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa05g0124	ATGGTAATGGAATCACCATCTGAAGATGAAGAAAAGCAAAGGATGGCAGTTGCCAAAAGGACATATATACTGCAAACAGTTGATAAAACCAAGTTCTTCCACGACGAAGCGGTCCAGTTCCCATCCTCATCTCCACTTCTCGAAACCATGCTTACGCCGAGTGACGTACAGGAGTTGTTGTCCCTCTTTCAATCCAGTCCGGCCAGTTCAAGCTCCGGTTCGCAGGGATCAAACCGAGCGGTTTACTCGGCGGACGAGAGAAAGCGCAGGCGCAAGCAATCGAACCGGGAGTCGGCCCGGCGGTCACGCTGGAGAAAGAAGAGGCATTTGGAGAACATGACGAACCAAATAAACCGCTTGAGAATTGAAAACCGAGAACTCAAAAACCGGCTAGGCTTCACCCTTCAGCAGCATCTCCTCGTGTCCCTTGATAATAGCCGCCTGAGATCCGAATTCGTAACCCTTCTCACCAGACTCTCGGATCTAGATCGGGTCTTGGGCCTCATGCATTCACAATAG	519	0.5067	MVMESPSEDEEKQRMAVAKRTYILQTVDKTKFFHDEAVQFPSSSPLLETMLTPSDVQELLSLFQSSPASSSSGSQGSNRAVYSADERKRRRKQSNRESARRSRWRKKRHLENMTNQINRLRIENRELKNRLGFTLQQHLLVSLDNSRLRSEFVTLLTRLSDLDRVLGLMHSQ	172

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa05g0124	172	FunFam	BZIP transcription factor	85	139	-	-
	Bisa05g0124	172	CDD	bZIP_plant_GBF1	88	138	IPR045314	GO:0003700\|GO:0006355
	Bisa05g0124	172	SMART	brlzneu	83	147	IPR004827	GO:0003700\|GO:0006355
	Bisa05g0124	172	PANTHER	BZIP TRANSCRIPTION FACTOR 44	51	169	-	-
	Bisa05g0124	172	MobiDBLite	consensus disorder prediction	66	110	-	-
	Bisa05g0124	172	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	85	131	IPR004827	GO:0003700\|GO:0006355
	Bisa05g0124	172	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	90	105	IPR004827	GO:0003700\|GO:0006355
	Bisa05g0124	172	Pfam	bZIP transcription factor	87	131	IPR004827	GO:0003700\|GO:0006355
	Bisa05g0124	172	MobiDBLite	consensus disorder prediction	93	108	-	-
	Bisa05g0124	172	Coils	Coil	110	137	-	-
	Bisa05g0124	172	SUPERFAMILY	Leucine zipper domain	87	138	IPR046347	GO:0003700\|GO:0006355
	Bisa05g0124	172	MobiDBLite	consensus disorder prediction	66	81	-	-
	Bisa05g0124	172	Gene3D	-	85	138	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa05g0124	Bisa-ChrBisa05	2012484	2015050	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa05g0124	33	166	bZIP Transcription Factor Family	AT3G49760	39.860	1.59e-23	89.0

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Bisa05g0124		bZIP_1	1.8e-07	CL0018